LOCUS BC012860 2166 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens RhoA/RAC/CDC42 exchange factor, mRNA (cDNA clone MGC:18298 IMAGE:4179764), complete cds. ACCESSION BC012860 VERSION BC012860.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2166) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2166) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (20-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 12 Row: j Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 19311007. FEATURES Location/Qualifiers source 1..2166 /db_xref="H-InvDB:HIT000036003" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:18298 IMAGE:4179764" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2166 /gene="GEFT" /gene_synonym="p63RhoGEF" /db_xref="GeneID:115557" /db_xref="MIM:610215" CDS 331..1755 /gene="GEFT" /gene_synonym="p63RhoGEF" /codon_start=1 /product="RhoA/RAC/CDC42 exchange factor" /protein_id="AAH12860.1" /db_xref="GeneID:115557" /db_xref="MIM:610215" /translation="MLEPALATGEELPELTLLTTLLEGPGDKTQPPEEETLSQAPESE EEQKKKALERSMYVLSELVETEKMYVDDLGQIVEGYMATMAAQGVPESLRGRDRIVFG NIQQIYEWHRDYFLQELQRCLKDPDWLAQLFIKHERRLHMYVVYCQNKPKSEHVVSEF GDSYFEELRQQLGHRLQLNDLLIKPVQRIMKYQLLLKDFLKYYNRAGMDTADLEQAVE VMCFVPKRCNDMMTLGRLRGFEGKLTAQGKLLGQDTFWVTEPEAGGLLSSRGRERRVF LFEQIIIFSEALGGGVRGGTQPGYVYKNSIKVSCLGLEGNLQGDPCRFALTSRGPEGG IQRYVLQAADPAISQAWIKHVAQILESQRDFLNALQSPIEYQRRESQTNSLGRPRGPG VGSPGRIRLGDQAQGSTHTPINGSLPSLLLSPKGEVARALLPLDKQALGDIPQAPHDS PPVSPTPKTPPCQARLAKLDEDEL" BASE COUNT 556 a 511 c 647 g 452 t ORIGIN 1 gggggtcgct gtgcctgtcc ccgtgtgatc cgaaaagtgc tggcaaaatg cggctgctgc 61 ttcgcccggg ggggtaaggg ggtgccctgg tgaaattttc tatcctggcc aactcaaatg 121 aggatggcaa gagagtgagc ccttggagag agaggctgag catcatgaag agaagaccct 181 gggagttccc tggggaccct gagtctggag ctggggcaag gccccccagg gcccgtcagt 241 ggcctgagga gatggttgga tcattccaaa cattgtctca gtgtggaaac tgaggcagac 301 agtggtcagg caggaccata tgagaactgg atgttggagc cagctctagc cacaggagag 361 gagctgccgg aactgacctt gctgaccaca ctgttggagg gccctggaga taagacgcag 421 ccacctgaag aggagacttt gtcccaagcc cctgagagtg aggaggaaca gaagaagaag 481 gctctggaaa ggagtatgta tgtcctgagt gaactggtag aaacagagaa aatgtacgtg 541 gacgacttgg ggcagattgt ggagggttat atggccacca tggctgctca gggggtcccc 601 gagagtcttc gaggccgtga caggattgtg tttgggaata tccagcaaat ctatgagtgg 661 caccgagact atttcttgca agagctacaa cggtgtctga aagatcctga ttggctggct 721 cagctattca tcaaacacga gcgccggctg catatgtatg tggtgtactg tcagaataag 781 cccaagtcag agcatgtggt gtcagagttt ggggacagct actttgagga gctccggcag 841 cagctggggc accgcctgca gctgaacgac ctcctcatca aacctgtgca gcggatcatg 901 aaataccagc tgctgctcaa ggattttctc aagtattaca atagagctgg gatggatact 961 gcagacctag agcaagctgt ggaggtcatg tgctttgtgc ccaagcgctg caacgatatg 1021 atgacgctgg ggagattgcg gggatttgag ggcaaactga ctgctcaggg gaagctcttg 1081 ggccaggaca ctttctgggt caccgagcct gaggctggag ggctgctatc ttcccgaggt 1141 cgagagaggc gcgtcttcct ctttgagcaa atcatcatct tcagtgaagc cctgggagga 1201 ggagtgagag gtggaacaca gcctggatat gtatacaaga acagcattaa ggtgagctgc 1261 ctgggactgg aggggaacct ccaaggtgac ccttgccgct ttgcactgac ctccagaggg 1321 ccagagggtg ggatccagcg ctatgtcctg caggctgcag accctgctat cagtcaggcc 1381 tggatcaagc atgtggctca gatcttggag agccaacggg acttcctcaa cgcattgcag 1441 tcacccattg agtaccagag acgggagagc cagaccaaca gcctggggcg gccaagaggg 1501 cctggagtgg ggagccctgg aagaattcgg cttggagatc aggcccaggg cagcacacac 1561 acacccatca atggctctct cccctctctg ctgctgtcac ccaaagggga ggtggccaga 1621 gccctcttgc cactggataa acaggccctt ggtgacatcc cccaggctcc ccatgactct 1681 cctccagtct ctccaactcc aaaaacccct ccctgccaag ccagacttgc caagctggat 1741 gaagatgagc tgtaactggt gaaaaccatg ggggtggtgc tgactcagcc gcctattccc 1801 caaggagctt cagggcagtc cttctggcac tgctccagaa ttcctccttc ttggtgtgtc 1861 tggagggtgg gcaaggctgg gagggatatc aacttggagg agaacaccta gacccaagga 1921 cttttttctg cccaaggaac acagtttcct tcagctccca tccctatgca tgcatcatgg 1981 tccccccaaa aggaggatat gtgggtgggt gggagggctg gggcaggggc cagatagaaa 2041 ttattggttt tgttttttaa ttttgttttt cctgttttct gagaataaag gttttgttat 2101 atcaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2161 aaaaaa //