LOCUS BC012860 2166 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens RhoA/RAC/CDC42 exchange factor, mRNA (cDNA clone
MGC:18298 IMAGE:4179764), complete cds.
ACCESSION BC012860
VERSION BC012860.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2166)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2166)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: j Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19311007.
FEATURES Location/Qualifiers
source 1..2166
/db_xref="H-InvDB:HIT000036003"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:18298 IMAGE:4179764"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2166
/gene="GEFT"
/gene_synonym="p63RhoGEF"
/db_xref="GeneID:115557"
/db_xref="MIM:610215"
CDS 331..1755
/gene="GEFT"
/gene_synonym="p63RhoGEF"
/codon_start=1
/product="RhoA/RAC/CDC42 exchange factor"
/protein_id="AAH12860.1"
/db_xref="GeneID:115557"
/db_xref="MIM:610215"
/translation="MLEPALATGEELPELTLLTTLLEGPGDKTQPPEEETLSQAPESE
EEQKKKALERSMYVLSELVETEKMYVDDLGQIVEGYMATMAAQGVPESLRGRDRIVFG
NIQQIYEWHRDYFLQELQRCLKDPDWLAQLFIKHERRLHMYVVYCQNKPKSEHVVSEF
GDSYFEELRQQLGHRLQLNDLLIKPVQRIMKYQLLLKDFLKYYNRAGMDTADLEQAVE
VMCFVPKRCNDMMTLGRLRGFEGKLTAQGKLLGQDTFWVTEPEAGGLLSSRGRERRVF
LFEQIIIFSEALGGGVRGGTQPGYVYKNSIKVSCLGLEGNLQGDPCRFALTSRGPEGG
IQRYVLQAADPAISQAWIKHVAQILESQRDFLNALQSPIEYQRRESQTNSLGRPRGPG
VGSPGRIRLGDQAQGSTHTPINGSLPSLLLSPKGEVARALLPLDKQALGDIPQAPHDS
PPVSPTPKTPPCQARLAKLDEDEL"
BASE COUNT 556 a 511 c 647 g 452 t
ORIGIN
1 gggggtcgct gtgcctgtcc ccgtgtgatc cgaaaagtgc tggcaaaatg cggctgctgc
61 ttcgcccggg ggggtaaggg ggtgccctgg tgaaattttc tatcctggcc aactcaaatg
121 aggatggcaa gagagtgagc ccttggagag agaggctgag catcatgaag agaagaccct
181 gggagttccc tggggaccct gagtctggag ctggggcaag gccccccagg gcccgtcagt
241 ggcctgagga gatggttgga tcattccaaa cattgtctca gtgtggaaac tgaggcagac
301 agtggtcagg caggaccata tgagaactgg atgttggagc cagctctagc cacaggagag
361 gagctgccgg aactgacctt gctgaccaca ctgttggagg gccctggaga taagacgcag
421 ccacctgaag aggagacttt gtcccaagcc cctgagagtg aggaggaaca gaagaagaag
481 gctctggaaa ggagtatgta tgtcctgagt gaactggtag aaacagagaa aatgtacgtg
541 gacgacttgg ggcagattgt ggagggttat atggccacca tggctgctca gggggtcccc
601 gagagtcttc gaggccgtga caggattgtg tttgggaata tccagcaaat ctatgagtgg
661 caccgagact atttcttgca agagctacaa cggtgtctga aagatcctga ttggctggct
721 cagctattca tcaaacacga gcgccggctg catatgtatg tggtgtactg tcagaataag
781 cccaagtcag agcatgtggt gtcagagttt ggggacagct actttgagga gctccggcag
841 cagctggggc accgcctgca gctgaacgac ctcctcatca aacctgtgca gcggatcatg
901 aaataccagc tgctgctcaa ggattttctc aagtattaca atagagctgg gatggatact
961 gcagacctag agcaagctgt ggaggtcatg tgctttgtgc ccaagcgctg caacgatatg
1021 atgacgctgg ggagattgcg gggatttgag ggcaaactga ctgctcaggg gaagctcttg
1081 ggccaggaca ctttctgggt caccgagcct gaggctggag ggctgctatc ttcccgaggt
1141 cgagagaggc gcgtcttcct ctttgagcaa atcatcatct tcagtgaagc cctgggagga
1201 ggagtgagag gtggaacaca gcctggatat gtatacaaga acagcattaa ggtgagctgc
1261 ctgggactgg aggggaacct ccaaggtgac ccttgccgct ttgcactgac ctccagaggg
1321 ccagagggtg ggatccagcg ctatgtcctg caggctgcag accctgctat cagtcaggcc
1381 tggatcaagc atgtggctca gatcttggag agccaacggg acttcctcaa cgcattgcag
1441 tcacccattg agtaccagag acgggagagc cagaccaaca gcctggggcg gccaagaggg
1501 cctggagtgg ggagccctgg aagaattcgg cttggagatc aggcccaggg cagcacacac
1561 acacccatca atggctctct cccctctctg ctgctgtcac ccaaagggga ggtggccaga
1621 gccctcttgc cactggataa acaggccctt ggtgacatcc cccaggctcc ccatgactct
1681 cctccagtct ctccaactcc aaaaacccct ccctgccaag ccagacttgc caagctggat
1741 gaagatgagc tgtaactggt gaaaaccatg ggggtggtgc tgactcagcc gcctattccc
1801 caaggagctt cagggcagtc cttctggcac tgctccagaa ttcctccttc ttggtgtgtc
1861 tggagggtgg gcaaggctgg gagggatatc aacttggagg agaacaccta gacccaagga
1921 cttttttctg cccaaggaac acagtttcct tcagctccca tccctatgca tgcatcatgg
1981 tccccccaaa aggaggatat gtgggtgggt gggagggctg gggcaggggc cagatagaaa
2041 ttattggttt tgttttttaa ttttgttttt cctgttttct gagaataaag gttttgttat
2101 atcaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2161 aaaaaa
//