LOCUS CK335206 500 bp mRNA linear EST 12-MAY-2010 DEFINITION H3151G03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3151G03 3', mRNA sequence. ACCESSION CK335206 VERSION CK335206.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 500) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3151 row: G column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..500 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3151G03-3" /db_xref="taxon:10090" /clone="H3151G03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 125 a 114 c 120 g 141 t ORIGIN 1 ccgggcttgc tgctgaattg cgtttaatta aggatagaaa tgtgtgacta ctacaggctg 61 cctctggagg gaaaagaaaa ggaccccttt ggttctgttg catgaagtaa acattgtcag 121 attctctttg aatcttcaca gcccatgtct agggaacagt gtggtggttt cttcagacaa 181 ttccttcatc ttccgtataa tgacttcaga ggcctcttag gtggcttctg ctattcctga 241 ggcaagaaag agcttcattt gagatccagt tcagcaagct ttgcctctgg aaagctgtca 301 tcgctggcat cactgtatcc atcactgtat ggcagcttgt tcatctgctg cagatgggca 361 ttcagattcc ccgttgctgc aagtaagagc cccaggtacg gaggggaagg cttcattggc 421 ctagaggaaa actcaggatg gaactggaca ccaatgaaat atggatgact tgtcaactca 481 acaatttcca tcctcttccc //