LOCUS CK335206 500 bp mRNA linear EST 12-MAY-2010
DEFINITION H3151G03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3151G03 3', mRNA sequence.
ACCESSION CK335206
VERSION CK335206.1
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 500)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT Contact: Dawood B. Dudekula
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
Plate: H3151 row: G column: 03
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..500
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3151G03-3"
/db_xref="taxon:10090"
/clone="H3151G03"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 125 a 114 c 120 g 141 t
ORIGIN
1 ccgggcttgc tgctgaattg cgtttaatta aggatagaaa tgtgtgacta ctacaggctg
61 cctctggagg gaaaagaaaa ggaccccttt ggttctgttg catgaagtaa acattgtcag
121 attctctttg aatcttcaca gcccatgtct agggaacagt gtggtggttt cttcagacaa
181 ttccttcatc ttccgtataa tgacttcaga ggcctcttag gtggcttctg ctattcctga
241 ggcaagaaag agcttcattt gagatccagt tcagcaagct ttgcctctgg aaagctgtca
301 tcgctggcat cactgtatcc atcactgtat ggcagcttgt tcatctgctg cagatgggca
361 ttcagattcc ccgttgctgc aagtaagagc cccaggtacg gaggggaagg cttcattggc
421 ctagaggaaa actcaggatg gaactggaca ccaatgaaat atggatgact tgtcaactca
481 acaatttcca tcctcttccc
//