LOCUS BG079136 666 bp mRNA linear EST 12-MAY-2010 DEFINITION H3036B11-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3036B11 5', mRNA sequence. ACCESSION BG079136 VERSION BG079136.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 666) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG079136.1. Other_ESTs: H3036B11-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3036 row: B column: 11 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..666 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3036B11-5" /db_xref="taxon:10090" /clone="H3036B11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 136 a 213 c 191 g 126 t ORIGIN 1 gagaacccct gctcagcagc tctgagaatg gcactggagg cgcagagatg gctccagctg 61 atgccaggac agagcggctc ctcaatgacc tcctgccctt ctgcagacca gtcccagagg 121 gccagcttgc tgccacagcc cttcagaaag tactgtccct gaagcagatc ctgctaagca 181 ctgaggaaga cagtggagcg gggcctcccc gcgatgggga tggggtgcct ggtggtaggg 241 cccccggccc agtgcacacc caggagattg aggaaaactt gcttagctta gaggtggcca 301 tcagacaact ggaggagttg gaagaggaat tttgtcgcct aagacccctc ctgtcccagc 361 ttggggggac tctgtccccc aacctggctg cacctgaacg ctctgctcgg acaggccttt 421 catgaagaga agagtggggg agaggatgca ggggggccca cccccacccc cacagctgcc 481 acagcatctc acaccccaga ggcctggagc agagggagat tggctgaact tgatagcaga 541 cctgctcggg tccctgcctc ccactctggc ctctgccttt ctccctcctg ccttctgctt 601 ggggaactca gggcttcact cccagagcac ccccttaatc cccacttttc aggccgtctc 661 agtatt //