LOCUS BG075101 954 bp mRNA linear EST 26-JAN-2001 DEFINITION H3143C10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3143C10 3', mRNA sequence. ACCESSION BG075101 VERSION BG075101.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 954) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3143C10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3143 row: C column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..954 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3143C10-3" /db_xref="taxon:10090" /clone="H3143C10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 408 a 180 c 203 g 163 t ORIGIN 1 gatggaaaag acaagtgaaa tttaatcagg aaagtcagtt ccgattgctc tgcagctggc 61 gaagtgtgga taaggctcca cacctgacaa aaaggtggga cctctgtgaa tatagggtcc 121 ctccctgatt tgatcactac ctcttgccct ctacttgtcc actggccatg cacaacaagg 181 aagggggggg aacacaccct gagaacttcg ggtcctggtc actggattcc ttacccacag 241 cccagcccct taaacacaat cctccctccc tccaaggcta aggcctcaca cctggcacca 301 gtactctcag gctcagaagg acaggcctgg aatagggcaa cagacttttg gaagccaaga 361 tctaaataca aagttcctga gcaggaaccc acatcagtcc cagggaccct gtagccagca 421 acgcagatat cactcaaaca ggaagaaagc ccatacttct ttgccgtgtg ggcccacata 481 aggcaccaca gtgtgatgtg cctgaggggc aggaaaggct catgggtcat ttgtcatcgg 541 ctcttcacta ggaccctgaa tagtgagaag ctaaggacag cagacaaaac cgtgccgaaa 601 gccaacagaa atcctcagga gaaagaagga ggtggggtaa aataatgtat gaaaaaaatg 661 tgagaaaata gcaatagtaa aaaattgggt aaagaaatct gtaataagca ttacgggtaa 721 aaacaagaaa ataaaaaaag gaaagaaacc gaagcatagg aaaaataaaa aagtaaaaaa 781 ataaggggga aaaaataaag aaaataaatt taaaagaata aaaagaaagg gtataaaaaa 841 ataaaaaaaa taaaataaga aaaaaaaaaa aaagattaaa aaaaagaaaa aaataaaaag 901 aaaaaaaaag aataaaaaaa agaaaaaaag taaaaataaa taaaaaaaaa aaaa //