LOCUS BG075101 954 bp mRNA linear EST 26-JAN-2001
DEFINITION H3143C10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3143C10 3', mRNA sequence.
ACCESSION BG075101
VERSION BG075101.1
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 954)
AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A.,
Tanaka,T.S., Carter,M.G. and Ko,M.S.H.
TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set
JOURNAL Unpublished
COMMENT Other_ESTs: H3143C10-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3143 row: C column: 10
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..954
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3143C10-3"
/db_xref="taxon:10090"
/clone="H3143C10"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 408 a 180 c 203 g 163 t
ORIGIN
1 gatggaaaag acaagtgaaa tttaatcagg aaagtcagtt ccgattgctc tgcagctggc
61 gaagtgtgga taaggctcca cacctgacaa aaaggtggga cctctgtgaa tatagggtcc
121 ctccctgatt tgatcactac ctcttgccct ctacttgtcc actggccatg cacaacaagg
181 aagggggggg aacacaccct gagaacttcg ggtcctggtc actggattcc ttacccacag
241 cccagcccct taaacacaat cctccctccc tccaaggcta aggcctcaca cctggcacca
301 gtactctcag gctcagaagg acaggcctgg aatagggcaa cagacttttg gaagccaaga
361 tctaaataca aagttcctga gcaggaaccc acatcagtcc cagggaccct gtagccagca
421 acgcagatat cactcaaaca ggaagaaagc ccatacttct ttgccgtgtg ggcccacata
481 aggcaccaca gtgtgatgtg cctgaggggc aggaaaggct catgggtcat ttgtcatcgg
541 ctcttcacta ggaccctgaa tagtgagaag ctaaggacag cagacaaaac cgtgccgaaa
601 gccaacagaa atcctcagga gaaagaagga ggtggggtaa aataatgtat gaaaaaaatg
661 tgagaaaata gcaatagtaa aaaattgggt aaagaaatct gtaataagca ttacgggtaa
721 aaacaagaaa ataaaaaaag gaaagaaacc gaagcatagg aaaaataaaa aagtaaaaaa
781 ataaggggga aaaaataaag aaaataaatt taaaagaata aaaagaaagg gtataaaaaa
841 ataaaaaaaa taaaataaga aaaaaaaaaa aaagattaaa aaaaagaaaa aaataaaaag
901 aaaaaaaaag aataaaaaaa agaaaaaaag taaaaataaa taaaaaaaaa aaaa
//