LOCUS BG073518 730 bp mRNA linear EST 12-MAY-2010 DEFINITION H3123E09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3123E09 3', mRNA sequence. ACCESSION BG073518 VERSION BG073518.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 730) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG073518.1. Other_ESTs: H3123E09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3123 row: E column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..730 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3123E09-3" /db_xref="taxon:10090" /clone="H3123E09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 240 a 130 c 170 g 190 t ORIGIN 1 aaagggttaa tttgcatgct ttatttacac acatatataa ttactgttca agagaaaaat 61 gggcaaacaa agcagttttc tacatttttc atgggcagtc ctggtagcaa gaattagagc 121 attctggcct acatgtcctc tggggaaaaa ggaaagaaag agtttataga aaacatcaat 181 ttttacaaat tttcagagct gcaaggagct acttacttag aacagggtaa gattcggaaa 241 gagtgtcagc ctccgggcag tagagcttgg gagctccctt agcctggaga tgggagcgtt 301 aggacctctg atgtgcttaa gcagtaaact ccttttttgg acttttccaa aggtgcccct 361 atagtgctat cagatagtga agaagaagaa atgattattt tggagccaga gaagaaccca 421 aagaaaataa ggtaacaaat ttctggcctc tttcaaatat acattaaaag ctggttctat 481 aaaatggggc acctttcaga gtcccagtga cccaatccag gacagatggg atacagtgag 541 ctgttatatt acttcattca cagagctcag accagtgcaa accagaaggc accaagtaaa 601 ggccaaggga aaaggaagaa gaagaagaga actgctaact aagctaaagt ggtggatctc 661 tgtgtgtgtg tgtgtgtata catactcagt gctaacagct ctgggtatct tacaagctga 721 acttcttgat //