LOCUS BG073518 730 bp mRNA linear EST 12-MAY-2010
DEFINITION H3123E09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3123E09 3', mRNA sequence.
ACCESSION BG073518
VERSION BG073518.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 730)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG073518.1.
Other_ESTs: H3123E09-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3123 row: E column: 09
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..730
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3123E09-3"
/db_xref="taxon:10090"
/clone="H3123E09"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 240 a 130 c 170 g 190 t
ORIGIN
1 aaagggttaa tttgcatgct ttatttacac acatatataa ttactgttca agagaaaaat
61 gggcaaacaa agcagttttc tacatttttc atgggcagtc ctggtagcaa gaattagagc
121 attctggcct acatgtcctc tggggaaaaa ggaaagaaag agtttataga aaacatcaat
181 ttttacaaat tttcagagct gcaaggagct acttacttag aacagggtaa gattcggaaa
241 gagtgtcagc ctccgggcag tagagcttgg gagctccctt agcctggaga tgggagcgtt
301 aggacctctg atgtgcttaa gcagtaaact ccttttttgg acttttccaa aggtgcccct
361 atagtgctat cagatagtga agaagaagaa atgattattt tggagccaga gaagaaccca
421 aagaaaataa ggtaacaaat ttctggcctc tttcaaatat acattaaaag ctggttctat
481 aaaatggggc acctttcaga gtcccagtga cccaatccag gacagatggg atacagtgag
541 ctgttatatt acttcattca cagagctcag accagtgcaa accagaaggc accaagtaaa
601 ggccaaggga aaaggaagaa gaagaagaga actgctaact aagctaaagt ggtggatctc
661 tgtgtgtgtg tgtgtgtata catactcagt gctaacagct ctgggtatct tacaagctga
721 acttcttgat
//