LOCUS BG072451 670 bp mRNA linear EST 12-MAY-2010 DEFINITION H3110F08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3110F08 3', mRNA sequence. ACCESSION BG072451 VERSION BG072451.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 670) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072451.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3110 row: F column: 08 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..670 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3110F08-3" /db_xref="taxon:10090" /clone="H3110F08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 162 a 130 c 139 g 239 t ORIGIN 1 aacatatgcc ttattcctgg ttcttttgcc agtgttgcgg actggattaa gcccttgtgc 61 atgttagagc aagggttctt ccaccaagct gtatctcttg ccttctgtga ctctttgcaa 121 ttagttttgg tcttagatgg gcttaggact tgtgagcagt tgttagccca ctactggcca 181 gcatgcattc attcagctag cagttgctgt gttggaagtt gggtgatggt ttccctgcat 241 ctggcaagca actactcatg gatgaggtgc tcagggtaag gttggcatct cctataagga 301 cattttcatt ttaccccttt tattctttag agttttttcc ttttggtgta taaaatgaca 361 atttctttct gaattgaaac caagtcttaa agtgagtttg ggactctgtt attcagtatt 421 gattgtgtgc tttcttgagc atacaagcta cagagacctc aaaattttta ttctcaaagt 481 tgcaatatga ttttgagatg aagacaacta cactgtgagg atgcaaacaa cagtgaatca 541 attcaactac gtaaggttct tcttagtaat tacaaatgtg ataagccatt ttctttcact 601 gcccagactt gtgcatacct tatgctattc agtttctgtg aaatttcttc tccatgcgag 661 cagcttgact //