LOCUS BG072451 670 bp mRNA linear EST 12-MAY-2010
DEFINITION H3110F08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3110F08 3', mRNA sequence.
ACCESSION BG072451
VERSION BG072451.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 670)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG072451.1.
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3110 row: F column: 08
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..670
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3110F08-3"
/db_xref="taxon:10090"
/clone="H3110F08"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 162 a 130 c 139 g 239 t
ORIGIN
1 aacatatgcc ttattcctgg ttcttttgcc agtgttgcgg actggattaa gcccttgtgc
61 atgttagagc aagggttctt ccaccaagct gtatctcttg ccttctgtga ctctttgcaa
121 ttagttttgg tcttagatgg gcttaggact tgtgagcagt tgttagccca ctactggcca
181 gcatgcattc attcagctag cagttgctgt gttggaagtt gggtgatggt ttccctgcat
241 ctggcaagca actactcatg gatgaggtgc tcagggtaag gttggcatct cctataagga
301 cattttcatt ttaccccttt tattctttag agttttttcc ttttggtgta taaaatgaca
361 atttctttct gaattgaaac caagtcttaa agtgagtttg ggactctgtt attcagtatt
421 gattgtgtgc tttcttgagc atacaagcta cagagacctc aaaattttta ttctcaaagt
481 tgcaatatga ttttgagatg aagacaacta cactgtgagg atgcaaacaa cagtgaatca
541 attcaactac gtaaggttct tcttagtaat tacaaatgtg ataagccatt ttctttcact
601 gcccagactt gtgcatacct tatgctattc agtttctgtg aaatttcttc tccatgcgag
661 cagcttgact
//