LOCUS BG064852 676 bp mRNA linear EST 26-JAN-2001 DEFINITION H3024E11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3024E11 3', mRNA sequence. ACCESSION BG064852 VERSION BG064852.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 676) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3024 row: E column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..676 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3024E11-3" /db_xref="taxon:10090" /clone="H3024E11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 214 a 140 c 150 g 172 t ORIGIN 1 cttttaaaat tattttaatg atatttttag ttggacacaa atgtatttat tttaccctag 61 caatagaaca aaatataatt tctttagcca tttttttttc atgagaatag tccattgtac 121 agttgagaag acagaaaaag gcctggggct tgattgcaac gggttcgaca tggttccagt 181 tgttgccgaa atgtaaaagg tttgcaggga agtgcaaacg ggtgcagaat ccccccccgg 241 ctttcccaag tcttgccagg aaaagtaaga tacagccaat ttgccccaca ggatcttgaa 301 gcctacgtct tgaaaaaaat acaatgcagg cctacagaaa aacaaaacaa aacaaaaaca 361 aaaaccggta gggccctatt tacagactca gttcaccaac tgccgcaagg aacatggccg 421 ggagggaggg ccccttgttt gttttacaat ctctctacac agcagcagaa acgtaaaata 481 cctggtgggc atttcttttt ccttggaaac aaataatcca atttaggata cccggggaaa 541 atacaaagtt ttggcaggtt ttataaaaat tcacaggact gtgaggttca gtctgacccg 601 ttttactaca aggggagaac catgggccaa cagagccgag tcttctggcc gagttggagg 661 gagctgcagg gcccca //