LOCUS BG064852 676 bp mRNA linear EST 26-JAN-2001
DEFINITION H3024E11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3024E11 3', mRNA sequence.
ACCESSION BG064852
VERSION BG064852.1
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 676)
AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A.,
Tanaka,T.S., Carter,M.G. and Ko,M.S.H.
TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set
JOURNAL Unpublished
COMMENT Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3024 row: E column: 11
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..676
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3024E11-3"
/db_xref="taxon:10090"
/clone="H3024E11"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 214 a 140 c 150 g 172 t
ORIGIN
1 cttttaaaat tattttaatg atatttttag ttggacacaa atgtatttat tttaccctag
61 caatagaaca aaatataatt tctttagcca tttttttttc atgagaatag tccattgtac
121 agttgagaag acagaaaaag gcctggggct tgattgcaac gggttcgaca tggttccagt
181 tgttgccgaa atgtaaaagg tttgcaggga agtgcaaacg ggtgcagaat ccccccccgg
241 ctttcccaag tcttgccagg aaaagtaaga tacagccaat ttgccccaca ggatcttgaa
301 gcctacgtct tgaaaaaaat acaatgcagg cctacagaaa aacaaaacaa aacaaaaaca
361 aaaaccggta gggccctatt tacagactca gttcaccaac tgccgcaagg aacatggccg
421 ggagggaggg ccccttgttt gttttacaat ctctctacac agcagcagaa acgtaaaata
481 cctggtgggc atttcttttt ccttggaaac aaataatcca atttaggata cccggggaaa
541 atacaaagtt ttggcaggtt ttataaaaat tcacaggact gtgaggttca gtctgacccg
601 ttttactaca aggggagaac catgggccaa cagagccgag tcttctggcc gagttggagg
661 gagctgcagg gcccca
//