LOCUS BC080643 1171 bp mRNA linear HUM 03-JAN-2005 DEFINITION Homo sapiens BCL2/adenovirus E1B 19kDa interacting protein 3, mRNA (cDNA clone IMAGE:4592001), partial cds. ACCESSION BC080643 VERSION BC080643.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1171) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1171) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (27-AUG-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 59 Row: d Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 7669480. FEATURES Location/Qualifiers source 1..1171 /db_xref="H-InvDB:HIT000265905" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4592001" /tissue_type="Kidney, renal cell adenocarcinoma" /clone_lib="NIH_MGC_14" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..1171 /gene="BNIP3" /gene_synonym="NIP3" /db_xref="GeneID:664" /db_xref="MIM:603293" CDS <1..687 /gene="BNIP3" /gene_synonym="NIP3" /codon_start=1 /product="BNIP3 protein" /protein_id="AAH80643.1" /db_xref="GeneID:664" /db_xref="MIM:603293" /translation="LGRGAPTSAFPPPAAEAHPAARRGLRSPQLPSGAMSQNGAPGMQ EESLQGSWVELHFSNNGNGGSVPASVSIYNGDMEKILLDAQHESGRSSSKSSHCDSPP RSQTPQDTNRASETDTHSIGEKNSSQSEEDDIERRKEVESILKKNSDWIWDWSSRPEN IPPKEFLFKHPKRTATLSMRNTSVMKKGGIFSAEFLKVFLPSLLLSHLLAIGLGIYIG RRLTTSTSTF" BASE COUNT 369 a 248 c 258 g 296 t ORIGIN 1 ctgggccgcg gcgctccgac ctccgctttc ccaccgcccg cagctgaagc acatcccgca 61 gcccggcgcg gactccgatc gccgcagttg ccctctggcg ccatgtcgca gaacggagcg 121 cccgggatgc aggaggagag cctgcagggc tcctgggtag aactgcactt cagcaataat 181 gggaacgggg gcagcgttcc agcctcggtt tctatttata atggagacat ggaaaaaata 241 ctgctggacg cacagcatga gtctggacgg agtagctcca agagctctca ctgtgacagc 301 ccacctcgct cgcagacacc acaagatacc aacagagctt ctgaaacaga tacccatagc 361 attggagaga aaaacagctc acagtctgag gaagatgata ttgaaagaag gaaagaagtt 421 gaaagcatct tgaagaaaaa ctcagattgg atatgggatt ggtcaagtcg gccggaaaat 481 attcccccca aggagttcct ctttaaacac ccgaagcgca cggccaccct cagcatgagg 541 aacacgagcg tcatgaagaa agggggcata ttctctgcag aatttctgaa agttttcctt 601 ccatctctgc tgctctctca tttgctggcc atcggattgg ggatctatat tggaaggcgt 661 ctgacaacct ccaccagcac cttttgatga agaactggag tctgacttgg ttcgttagtg 721 gattacttct gagcttgcaa catagctcac tgaagagctg ttagatcctg gggtggccac 781 gtcacttgtg tttatttgtt ctgtaaatgc tgcgttccta atttagtaaa ataaaagaat 841 agacactaaa atcatgttga tctataatta cacctatggg atcaataagc atgtcagact 901 gattaatgtc tactgtgaaa atttggtagt aaattttcat ttgatattag atataaatat 961 ctgaatataa ataattttaa tatactagtc atgatgtgtg ttgtatttta aaaattatct 1021 gcaaccttaa ttcagctgaa gtactttata tttcaaaaga atgaataaca ttgataataa 1081 aatcgctact ttaaggggtt tgtccaaaat aaatattgtg gccttatata tcaaaaaaaa 1141 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a //