LOCUS BC080617 961 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis), mRNA (cDNA clone MGC:99545 IMAGE:6252628), complete cds. ACCESSION BC080617 VERSION BC080617.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 961) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 961) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (27-AUG-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 59 Row: i Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 40805828. FEATURES Location/Qualifiers source 1..961 /db_xref="H-InvDB:HIT000265882" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:99545 IMAGE:6252628" /tissue_type="Skin, melanoma, melanotic" /clone_lib="NIH_MGC_112" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..961 /gene="COPS8" /gene_synonym="COP9" /gene_synonym="CSN8" /gene_synonym="MGC1297" /gene_synonym="SGN8" /db_xref="GeneID:10920" /db_xref="HGNC:HGNC:24335" CDS 21..650 /gene="COPS8" /gene_synonym="COP9" /gene_synonym="CSN8" /gene_synonym="MGC1297" /gene_synonym="SGN8" /codon_start=1 /product="COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)" /protein_id="AAH80617.1" /db_xref="GeneID:10920" /db_xref="HGNC:HGNC:24335" /translation="MPVAVMAESAFSFKKLLDQCENQELEAPGGIATPPVYGQLLALY LLHNDMNNARYLWKRIPPAIKSANSELGGIWSVGQRIWQRDFPGIYTTINAHQWSETV QPIMEALRDATRRRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGILEQGWQADSTTR MVLPRKPVAGALDVSFNKFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN" BASE COUNT 289 a 195 c 206 g 271 t ORIGIN 1 cggcgaggcc ggccgcgaag atgccagtgg cggtgatggc ggaaagcgcc tttagtttca 61 aaaagttgct ggatcagtgc gagaaccagg agctcgaggc ccctggagga attgctacac 121 ccccagtgta tggtcagctt ctagctttat atttgctcca taatgacatg aataatgcaa 181 gatatctttg gaaaagaata ccacctgcta taaaatctgc aaattctgaa cttgggggaa 241 tttggtcagt aggacaaaga atctggcaga gagatttccc tgggatctat acaaccatca 301 acgctcacca gtggtctgag acggtccagc caattatgga agcacttaga gatgcaacaa 361 ggagacgcgc ctttgccctg gtctctcaag cgtatacttc aatcatcgcc gatgattttg 421 cagcctttgt tggacttcct gtagaagagg ctgtgaaagg catattagaa caaggatggc 481 aagctgattc caccacaaga atggttctgc ccagaaagcc agttgcaggg gccctggatg 541 tttcctttaa caagtttatt cccttatcag agcctgctcc agttccccca atacccaatg 601 aacagcagtt agccagactg acggattatg tggctttcct tgaaaactga tttatcactc 661 tgagttcaag attcatcttc agaatcctgt atactgacaa acgtagaaat gtaaagtttg 721 tattttcaat ttattggatg gcttaagcac ctcagcattc cttactatgt gataaaatac 781 atatagaata taagatatac tatatacatt ttgtccataa acgttatgct gaatagttgt 841 tgaaacagtt ctcattttgt agtatttaat aatctggatg gagcctgtca gtattacagt 901 tagttttcta gtgactcata aaataagatt tcctgtttca tgtaaaaaaa aaaaaaaaaa 961 a //