LOCUS BC078143 1889 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens C-type lectin domain family 18, member A, mRNA (cDNA clone MGC:87728 IMAGE:5761001), complete cds. ACCESSION BC078143 VERSION BC078143.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1889) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1889) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-JUL-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 174 Row: d Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 58866047. FEATURES Location/Qualifiers source 1..1889 /db_xref="H-InvDB:HIT000265702" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:87728 IMAGE:5761001" /tissue_type="Colon, Kidney, Stomach, adult, whole pooled" /clone_lib="NIH_MGC_116" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1889 /gene="CLEC18A" /gene_synonym="MRCL" /gene_synonym="MRCL1" /db_xref="GeneID:348174" /db_xref="HGNC:HGNC:30388" CDS 121..1461 /gene="CLEC18A" /gene_synonym="MRCL" /gene_synonym="MRCL1" /codon_start=1 /product="C-type lectin domain family 18, member A" /protein_id="AAH78143.1" /db_xref="GeneID:348174" /db_xref="HGNC:HGNC:30388" /translation="MLHPETSPGRGHLLAVLLALLGTAWAEVWPPQLQEQAPMAGALN RKESFLLLSLHNRLRSWVQPPAADMRRLDWSDSLAQLAQARAALCGTPTPSLASGLWR TLQVGWNMQLLPAGLVSFVEVVSLWFAEGQRYSHAAGECARNATCTHYTQLVWATSSQ LGCGRHLCSAGQAAIEAFVCAYSPRGNWEVNGKTIVPYKKGAWCSLCTASVSGCFKAW DHAGGLCEVPRNPCRMSCQNHGRLNISTCHCHCPPGYTGRYCQVRCSLQCVHGRLREE ECSCVCDIGYGGAQCATKVHFPFHTCDLRIDGDCFMVSSEADTYYRARMKCQRKGGVL AQIKSQKVQDILAFYLGRLETTNEVIDSDFETRNFWIGLTYKTAKDSFRWATGEHQAF TSFAFGQPDNHGFGNCVELQASAAFNWNNQRCKTRNRYICQFAQEHISRWGPGS" BASE COUNT 425 a 563 c 563 g 338 t ORIGIN 1 ttttcctcgt gcagcccagc ctgactcctg gagattgtga atagctccat ccagcctgag 61 aaacaagccg ggtggctgag ccaggctgtg cacggagcgc ctgacgggcc caacagaccc 121 atgctgcatc cagagacctc ccctggccgg gggcatctcc tggctgtgct cctggccctc 181 cttggcaccg cctgggcaga ggtgtggcca ccccagctgc aggagcaggc tccgatggcc 241 ggagccctga acaggaagga gagtttcttg ctcctctccc tgcacaaccg cctgcgcagc 301 tgggtccagc cccctgcggc tgacatgcgg aggctggact ggagtgacag cctggcccag 361 ctggctcaag ccagggcagc cctctgtgga accccaaccc cgagcctggc gtccggcctg 421 tggcgcaccc tgcaagtggg ctggaacatg cagctgctac ccgcgggctt ggtgtccttt 481 gtcgaagtgg tcagcctatg gtttgcagag gggcagcggt acagccacgc ggcaggagag 541 tgtgctcgca acgccacctg cacccactac acgcagctcg tgtgggccac ctcaagccag 601 ctgggctgtg ggcggcacct gtgctctgca ggccaggcag cgatagaagc ctttgtctgt 661 gcctactccc ccagaggcaa ctgggaggtc aacgggaaga caatcgtccc ctataagaag 721 ggtgcctggt gttcgctctg cacagccagt gtctcaggct gcttcaaagc ctgggaccat 781 gcaggggggc tctgtgaggt ccccaggaat ccttgtcgca tgagctgcca gaaccatgga 841 cgtctcaaca tcagcacctg ccactgccac tgtccccctg gctacacggg cagatactgc 901 caagtgaggt gcagcctgca gtgtgtgcac ggccggctcc gggaggagga gtgctcgtgc 961 gtctgtgaca tcggctacgg gggagcccag tgtgccacca aggtgcattt tcccttccac 1021 acctgtgacc tgaggatcga cggagactgc ttcatggtgt cttcagaggc agacacctat 1081 tacagagcca ggatgaaatg tcagaggaaa ggcggggtgc tggcccagat caagagccag 1141 aaagtgcagg acatcctcgc cttctatctg ggccgcctgg agaccaccaa cgaggtgatt 1201 gacagtgact tcgagaccag gaacttctgg atcgggctca cctacaagac cgccaaggac 1261 tccttccgct gggccacagg ggagcaccag gccttcacca gttttgcctt tgggcagcct 1321 gacaaccacg ggtttggcaa ctgcgtggag ctgcaggctt cagctgcctt caactggaac 1381 aaccagcgct gcaaaacccg aaaccgttac atctgccagt ttgcccagga gcacatctcc 1441 cggtggggcc cagggtcctg aggcctgacc acatggctcc ctcgcctgcc ctgggagcac 1501 cggctctgct tacctgtccg cccacctgtc tggaacaagg gccaggttaa gaccacatgc 1561 ctcatgtcca aagaggtctc agaccttgca caatgccaga agttgggcag agagaggcag 1621 ggaggccagt gagggccagg gagtgagtgt tagaagaagc tggggccctt cgcctgcttt 1681 tgattgggaa gatgggcttc aattagatgg caaaggagag gacaccgcca gtggtccaaa 1741 aaggctgctc tcttccacct ggcccagacc ctgtggggca gcggagcttc cctgtggcat 1801 gaaccccaca gggtattaaa ttatgaatca gctgaaaaaa aaaaaaaaaa aaaaaaaaaa 1861 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa //