LOCUS BC077718 1703 bp mRNA linear HUM 19-MAR-2007 DEFINITION Homo sapiens keratin 13, mRNA (cDNA clone MGC:78404 IMAGE:5479174), complete cds. ACCESSION BC077718 VERSION BC077718.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1703) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1703) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-JUL-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 54 Row: g Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 24234693. FEATURES Location/Qualifiers source 1..1703 /db_xref="H-InvDB:HIT000265683" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:78404 IMAGE:5479174" /tissue_type="Brain, astrocytoma, grade IV" /clone_lib="NIH_MGC_98" /lab_host="DH10B" /note="Vector: pOTB7" gene 1..1703 /gene="KRT13" /gene_synonym="CK13" /gene_synonym="K13" /db_xref="GeneID:3860" /db_xref="HGNC:HGNC:6415" /db_xref="MIM:148065" CDS 41..1417 /gene="KRT13" /gene_synonym="CK13" /gene_synonym="K13" /codon_start=1 /product="keratin 13" /protein_id="AAH77718.2" /db_xref="GeneID:3860" /db_xref="HGNC:HGNC:6415" /db_xref="MIM:148065" /translation="MSLRLQSSSASYGGGFGGGSCQLGGGRGVSTCSTRFVSGGSAGG YGGGVSCGFGGGAGSGFGGGYGGGLGGGYGGGLGGGFGGGFAGGFVDFGACDGGLLTG NEKITMQNLNDRLASYLEKVRALEEANADLEVKIRDWHLKQSPASPERDYSPYYKTIE ELRDKILTATIENNRVILEIDNARLAVDDFRLKYENELALRQSVEADINGLRRVLDEL TLSKTDLEMQIESLNEELAYMKKNHEEEMKEFSNQVVGQVNVEMDATPGIDLTRVLAE MREQYEAMAERNRRDAEEWFHAKSAELNKEVSTNTAMIQTSKTEITELRRTLQGLEIE LQSQLSMKAGLENTVAETECRYALQLQQIQGLISSIEAQLSELRSEMECQNQEYKMLL DIKTRLEQEIATYRSLLEGQDAKMIGFPSSAGSVSPRSTSVTTTSSASVTTTSNASGR RTSDVRRP" BASE COUNT 374 a 462 c 518 g 349 t ORIGIN 1 caagcttcta tctgcacctg ctctcaatcc tgctctcacc atgagcctcc gcctgcagag 61 ctcctctgcc agctatggag gtggtttcgg gggtggctct tgccagctgg gaggaggccg 121 tggtgtctct acctgttcaa ctcggtttgt gtctggggga tcagctgggg gctatggagg 181 cggcgtgagc tgtggttttg gtggaggggc tggtagtggc tttggaggtg gctatggagg 241 tggccttgga ggtggctatg gaggtggcct tggaggtggc tttggtgggg gttttgctgg 301 tggctttgtt gactttggtg cttgtgatgg cggcctcctc actggcaatg agaagatcac 361 catgcagaac ctcaacgacc gcctggcttc ctacctggag aaggtgcgcg ccctggagga 421 ggccaacgct gacctggagg tgaagatccg tgactggcac ctgaagcaga gcccagctag 481 ccctgagcgg gactacagcc cctactacaa gaccattgaa gagctccggg acaagatcct 541 gaccgccacc attgaaaaca accgggtcat cctggagatt gacaatgcca ggctggctgt 601 ggacgacttc aggctcaagt atgagaatga gctggccctg cgccagagcg tggaggccga 661 catcaacggc ctgcgccggg tgctggatga gctcactctg tctaagactg acctggagat 721 gcagatcgag agcctgaatg aagagctagc ctacatgaag aagaaccatg aagaggagat 781 gaaggaattt agcaaccagg tggtcggcca ggtcaacgtg gagatggatg ccaccccagg 841 cattgacctg acccgcgtgc tggcagagat gagggagcag tacgaggcca tggcagagag 901 gaaccgccgg gatgctgagg aatggttcca cgccaagagt gcagagctga acaaggaggt 961 gtctaccaac actgccatga ttcagaccag caagacagag atcacggagc tcaggcgcac 1021 gctccaaggc ctggagattg agctgcagtc ccagctgagc atgaaagcgg ggctggagaa 1081 cacggtggca gagacggagt gccgctatgc cctgcagctg cagcagatcc agggactcat 1141 cagcagcatc gaggcccagc tgagcgagct ccgcagtgag atggagtgcc agaaccaaga 1201 gtacaagatg ctgctggaca tcaagacacg tctggagcag gagatcgcca cctaccgcag 1261 cctgctcgag ggccaggacg ccaagatgat tggtttccct tcctcagcag gaagcgtcag 1321 cccccgtagc acctctgtta ccacgacttc tagtgcctct gttaccacca cctctaatgc 1381 ctctggtcgc cgcacttctg atgtccgtag gccttaaatc tgcctggcgt cccctccctc 1441 tgtcttcagc acccagagga ggagagagcc ggcagttccc tgcaggagag aggaggggct 1501 gctggaccca aggctcagtc cctctgctct caggaccccc tgtcctgact ctctcctgat 1561 ggtgggccct ctgtgctctt ctcttcctgt cggatctctc tcctctctga cctggatacg 1621 ctttggtttc tcaacttctc taccccaaag aaaagattat tcaataaagt ttcctgcctt 1681 tctgcaaaaa aaaaaaaaaa aaa //