LOCUS BC077718 1703 bp mRNA linear HUM 19-MAR-2007
DEFINITION Homo sapiens keratin 13, mRNA (cDNA clone MGC:78404 IMAGE:5479174),
complete cds.
ACCESSION BC077718
VERSION BC077718.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1703)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1703)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-JUL-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 54 Row: g Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24234693.
FEATURES Location/Qualifiers
source 1..1703
/db_xref="H-InvDB:HIT000265683"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:78404 IMAGE:5479174"
/tissue_type="Brain, astrocytoma, grade IV"
/clone_lib="NIH_MGC_98"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..1703
/gene="KRT13"
/gene_synonym="CK13"
/gene_synonym="K13"
/db_xref="GeneID:3860"
/db_xref="HGNC:HGNC:6415"
/db_xref="MIM:148065"
CDS 41..1417
/gene="KRT13"
/gene_synonym="CK13"
/gene_synonym="K13"
/codon_start=1
/product="keratin 13"
/protein_id="AAH77718.2"
/db_xref="GeneID:3860"
/db_xref="HGNC:HGNC:6415"
/db_xref="MIM:148065"
/translation="MSLRLQSSSASYGGGFGGGSCQLGGGRGVSTCSTRFVSGGSAGG
YGGGVSCGFGGGAGSGFGGGYGGGLGGGYGGGLGGGFGGGFAGGFVDFGACDGGLLTG
NEKITMQNLNDRLASYLEKVRALEEANADLEVKIRDWHLKQSPASPERDYSPYYKTIE
ELRDKILTATIENNRVILEIDNARLAVDDFRLKYENELALRQSVEADINGLRRVLDEL
TLSKTDLEMQIESLNEELAYMKKNHEEEMKEFSNQVVGQVNVEMDATPGIDLTRVLAE
MREQYEAMAERNRRDAEEWFHAKSAELNKEVSTNTAMIQTSKTEITELRRTLQGLEIE
LQSQLSMKAGLENTVAETECRYALQLQQIQGLISSIEAQLSELRSEMECQNQEYKMLL
DIKTRLEQEIATYRSLLEGQDAKMIGFPSSAGSVSPRSTSVTTTSSASVTTTSNASGR
RTSDVRRP"
BASE COUNT 374 a 462 c 518 g 349 t
ORIGIN
1 caagcttcta tctgcacctg ctctcaatcc tgctctcacc atgagcctcc gcctgcagag
61 ctcctctgcc agctatggag gtggtttcgg gggtggctct tgccagctgg gaggaggccg
121 tggtgtctct acctgttcaa ctcggtttgt gtctggggga tcagctgggg gctatggagg
181 cggcgtgagc tgtggttttg gtggaggggc tggtagtggc tttggaggtg gctatggagg
241 tggccttgga ggtggctatg gaggtggcct tggaggtggc tttggtgggg gttttgctgg
301 tggctttgtt gactttggtg cttgtgatgg cggcctcctc actggcaatg agaagatcac
361 catgcagaac ctcaacgacc gcctggcttc ctacctggag aaggtgcgcg ccctggagga
421 ggccaacgct gacctggagg tgaagatccg tgactggcac ctgaagcaga gcccagctag
481 ccctgagcgg gactacagcc cctactacaa gaccattgaa gagctccggg acaagatcct
541 gaccgccacc attgaaaaca accgggtcat cctggagatt gacaatgcca ggctggctgt
601 ggacgacttc aggctcaagt atgagaatga gctggccctg cgccagagcg tggaggccga
661 catcaacggc ctgcgccggg tgctggatga gctcactctg tctaagactg acctggagat
721 gcagatcgag agcctgaatg aagagctagc ctacatgaag aagaaccatg aagaggagat
781 gaaggaattt agcaaccagg tggtcggcca ggtcaacgtg gagatggatg ccaccccagg
841 cattgacctg acccgcgtgc tggcagagat gagggagcag tacgaggcca tggcagagag
901 gaaccgccgg gatgctgagg aatggttcca cgccaagagt gcagagctga acaaggaggt
961 gtctaccaac actgccatga ttcagaccag caagacagag atcacggagc tcaggcgcac
1021 gctccaaggc ctggagattg agctgcagtc ccagctgagc atgaaagcgg ggctggagaa
1081 cacggtggca gagacggagt gccgctatgc cctgcagctg cagcagatcc agggactcat
1141 cagcagcatc gaggcccagc tgagcgagct ccgcagtgag atggagtgcc agaaccaaga
1201 gtacaagatg ctgctggaca tcaagacacg tctggagcag gagatcgcca cctaccgcag
1261 cctgctcgag ggccaggacg ccaagatgat tggtttccct tcctcagcag gaagcgtcag
1321 cccccgtagc acctctgtta ccacgacttc tagtgcctct gttaccacca cctctaatgc
1381 ctctggtcgc cgcacttctg atgtccgtag gccttaaatc tgcctggcgt cccctccctc
1441 tgtcttcagc acccagagga ggagagagcc ggcagttccc tgcaggagag aggaggggct
1501 gctggaccca aggctcagtc cctctgctct caggaccccc tgtcctgact ctctcctgat
1561 ggtgggccct ctgtgctctt ctcttcctgt cggatctctc tcctctctga cctggatacg
1621 ctttggtttc tcaacttctc taccccaaag aaaagattat tcaataaagt ttcctgcctt
1681 tctgcaaaaa aaaaaaaaaa aaa
//