LOCUS BC073903 1910 bp mRNA linear HUM 03-AUG-2004 DEFINITION Homo sapiens chromodomain helicase DNA binding protein 8, mRNA (cDNA clone IMAGE:4415955), partial cds. ACCESSION BC073903 VERSION BC073903.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1910) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1910) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (23-JUN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 166 Row: d Column: 15 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis. FEATURES Location/Qualifiers source 1..1910 /db_xref="H-InvDB:HIT000265127" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4415955" /tissue_type="Duodenum, adenocarcinoma" /clone_lib="NIH_MGC_88" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..1910 /gene="CHD8" /gene_synonym="HELSNF1" /gene_synonym="KIAA1564" /db_xref="GeneID:57680" CDS <1..1481 /gene="CHD8" /gene_synonym="HELSNF1" /gene_synonym="KIAA1564" /codon_start=3 /product="CHD8 protein" /protein_id="AAH73903.1" /db_xref="GeneID:57680" /translation="SSSSSTDESEDEKEEKLTDQSRSKLYDEESLLSLTMSQDGFPNE DGEQMTPELLLLQERQRASEWPKDRVLINRIDLVCQAVLSGKWPSSRRSQEMVTGGIL GPGNHLLDSPSLTPGEYGDSPVPTPRSSSAASMAEEEASAVSTAAAQFTKLRRGMDEK EFTVQIKDEEGLKLTFQKHKLMANGVMGDGHPLFHKKKGNRKKLVELEVECMEEPNHL DVDLETRIPVINKVDGTLLVGEDAPRRAELEMWLQGHPEFAVDPRFLAYMEDRRKQKW QRCKKNNKAELNCLGMEPVQTANSRNGKKGHHTETVFNRVLPGPIAPESSKKRARRMR PDLSKMMALMQGGSTGSLSLHNTFQHSSSGLQSVSSLGHSSATSASLPFMPFVMGGAP SSPHVDSSTMLHHHHHHPHPHHHHHHHPGLRAPGYPSSPVTTASGTTLRLPPLQPEED DDEDEEDDDDLSQGYDSSERDFSLIDDPMMPANSDSSEDADD" BASE COUNT 534 a 460 c 499 g 417 t ORIGIN 1 ccagctccag ctccagcact gatgagagtg aggatgagaa ggaagagaag ctaactgacc 61 agtcccgctc aaagctctat gatgaagaga gtctcctgtc cctcactatg tcccaagatg 121 gattcccaaa tgaagatgga gaacaaatga cccctgagct tctgctactg caggaaagac 181 aaagagcctc tgagtggccc aaggatcgtg tcctgataaa ccgtattgac ctcgtctgcc 241 aggctgtact ctcagggaag tggccttcta gccgtaggag ccaggaaatg gtaacaggag 301 gaattttggg gccaggcaac cacttgctag acagtccctc attgactcct ggagaatatg 361 gtgactctcc agtccccaca ccacgaagta gtagtgcagc ttccatggca gaggaggaag 421 catctgcagt cagcacagcg gcagcccagt tcaccaaact tcgccgaggc atggatgaaa 481 aggagtttac agttcaaatc aaagatgagg aaggattgaa gttaacattc cagaagcaca 541 agttgatggc gaatggagta atgggagatg gacatccact gtttcataag aagaagggga 601 acagaaagaa gctagtagag ctggaggtgg agtgcatgga agagcctaat caccttgatg 661 tggacctgga gacccggatc cctgtcatca ataaggtgga tggtactttg ctggtgggtg 721 aggatgcccc tcgccgggct gaactggaga tgtggttaca gggtcatcca gagtttgctg 781 ttgatccccg atttctagcg tatatggagg atcgcagaaa acagaagtgg caaagatgta 841 aaaaaaataa taaggcagaa ttgaactgtt tgggaatgga accagtacag acagctaact 901 ctagaaatgg gaaaaagggt catcacactg aaacggtgtt caaccgggtt ttgccagggc 961 ctattgcacc agagagcagc aagaagcggg cccgtaggat gcgaccagac ctttctaaga 1021 tgatggccct catgcagggt ggaagcactg ggtctctatc tctgcataac acgttccaac 1081 acagcagtag tggcctacag tctgtgtcat ctttgggtca cagcagtgcc acttctgcat 1141 ctttgccttt tatgccattt gtgatgggtg gtgcaccatc atcccctcat gtagactcca 1201 gcaccatgct tcatcaccac caccaccacc cccaccccca ccatcaccac catcaccatc 1261 caggcttgag agcccctggc tacccctctt caccagtgac taccgcctct ggtactacct 1321 tgcggttgcc accactgcaa cctgaggagg atgacgatga ggatgaagaa gatgatgatg 1381 acttatctca gggctatgac agctcagaaa gggacttctc actcattgat gatcctatga 1441 tgccagctaa ctcagactcc agtgaagatg ctgatgactg aagccccagc atgggcccca 1501 ttgcttgggc ggctgctgta ttttcattta ctctggccct tggactatgg aaacgtggga 1561 ggggcagggg agatgtgggg aagtccagga ctccaggagg tgaaaaggaa aaaaaaaaaa 1621 aaatgtacct gattgctccc aattatgaga ggattgggtg ggcaggggaa ctcctaaaat 1681 aatacatgac cacttcctca tttctgggga aggaaaggag actagagcag ctggtgtgct 1741 cacccctccc tagtcacctc cattaaccac agactatgta gcgctggccc tagcctctgg 1801 cagagcctgt tcctggccga actgtggata cagctggagg gtcaggaact gttaccttct 1861 ttccccttgg cattaataaa tttaagttaa tccttaaaaa aaaaaaaaaa //