LOCUS BC072014 922 bp mRNA linear HUM 25-AUG-2005 DEFINITION Homo sapiens Y box binding protein 1, mRNA (cDNA clone IMAGE:5556363), partial cds. ACCESSION BC072014 VERSION BC072014.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 922) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 922) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 58 Row: h Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34098945. FEATURES Location/Qualifiers source 1..922 /db_xref="H-InvDB:HIT000264817" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5556363" /tissue_type="Kidney, Wilm's tumor" /clone_lib="NIH_MGC_108" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..>922 /gene="YBX1" /gene_synonym="BP-8" /gene_synonym="CSDA2" /gene_synonym="CSDB" /gene_synonym="DBPB" /gene_synonym="MDR-NF1" /gene_synonym="NSEP-1" /gene_synonym="YB-1" /gene_synonym="YB1" /db_xref="GeneID:4904" /db_xref="MIM:154030" CDS 124..>922 /gene="YBX1" /gene_synonym="BP-8" /gene_synonym="CSDA2" /gene_synonym="CSDB" /gene_synonym="DBPB" /gene_synonym="MDR-NF1" /gene_synonym="NSEP-1" /gene_synonym="YB-1" /gene_synonym="YB1" /codon_start=1 /product="YBX1 protein" /protein_id="AAH72014.1" /db_xref="GeneID:4904" /db_xref="MIM:154030" /translation="MSSEAETQQPPAAPPAAPALSAADTKPGTTGSGAGSGGPGGLTS AAPAGGDKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRS VGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQ NYQNSESGEKNEGSESAPEGQAQQRRPYRRRRFPPYYMRRPYGRRPQYSNPPVQGEVM EGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEKKKKK" BASE COUNT 256 a 260 c 277 g 129 t ORIGIN 1 ggagcggaga gcggacccca gagagccctg agcagcccca ccgccgccgc cggcctagtt 61 accatcacac cccgggagga gccgcagctg ccgcagccgg ccccagtcac catcaccgca 121 accatgagca gcgaggccga gacccagcag ccgcccgccg ccccccccgc cgcccccgcc 181 ctcagcgccg ccgacaccaa gcccggcact acgggcagcg gcgcagggag cggtggcccg 241 ggcggcctca catcggcggc gcctgccggc ggggacaaga aggtcatcgc aacgaaggtt 301 ttgggaacag taaaatggtt caatgtaagg aacggatatg gtttcatcaa caggaatgac 361 accaaggaag atgtatttgt acaccagact gccataaaga agaataaccc caggaagtac 421 cttcgcagtg taggagatgg agagactgtg gagtttgatg ttgttgaagg agaaaagggt 481 gcggaggcag caaatgttac aggtcctggt ggtgttccag ttcaaggcag taaatatgca 541 gcagaccgta accattatag acgctatcca cgtcgtaggg gtcctccacg caattaccag 601 caaaattacc agaatagtga gagtggggaa aagaacgagg gatcggagag tgctcccgaa 661 ggccaggccc aacaacgccg gccctaccgc aggcgaaggt tcccacctta ctacatgcgg 721 agaccctatg ggcgtcgacc acagtattcc aaccctcctg tgcagggaga agtgatggag 781 ggtgctgaca accagggtgc aggagaacaa ggtagaccag tgaggcagaa tatgtatcgg 841 ggatatagac cacgattccg caggggccct cctcgccaaa gacagcctag agaggacggc 901 aatgaaaaaa aaaaaaaaaa aa //