LOCUS BC071873 1171 bp mRNA linear HUM 06-JUN-2006 DEFINITION Homo sapiens spectrin repeat containing, nuclear envelope 2, mRNA (cDNA clone IMAGE:5428650), complete cds. ACCESSION BC071873 VERSION BC071873.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1171) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1171) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 58 Row: f Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 33624847 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1171 /db_xref="H-InvDB:HIT000264686" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5428650" /tissue_type="Brain, astrocytoma, grade IV" /clone_lib="NIH_MGC_98" /lab_host="DH10B" /note="Vector: pOTB7" gene 1..1171 /gene="SYNE2" /gene_synonym="DKFZP434H2235" /gene_synonym="KIAA1011" /gene_synonym="Nesprin-2" /gene_synonym="NUA" /gene_synonym="NUANCE" /gene_synonym="SYNE-2" /db_xref="GeneID:23224" /db_xref="HGNC:HGNC:17084" /db_xref="MIM:608442" CDS 204..1061 /gene="SYNE2" /gene_synonym="DKFZP434H2235" /gene_synonym="KIAA1011" /gene_synonym="Nesprin-2" /gene_synonym="NUA" /gene_synonym="NUANCE" /gene_synonym="SYNE-2" /codon_start=1 /product="SYNE2 protein" /protein_id="AAH71873.1" /db_xref="GeneID:23224" /db_xref="HGNC:HGNC:17084" /db_xref="MIM:608442" /translation="MASSPELPTEDEQGSWGIDDLHISLQAEQEDTQKKAFTCWINSQ LARHTSPSVISDLFTDIKKGHVLLDLLEVLSGQQLPRDKGSNTFQCRINIEHALTFLR NRSIKLINIHVTDIIDGNPSIILGLIWTIILHFHIEKLAQTLSCNYNQPSLDDVSVVD SSPASSPPAKKCSKVQARWQMSARKALLLWAQEQCATYESVNVTDFKSSWRNGMAFLA IIHALRPDLIDMKSVKHRSNKDNLREAFRIAEQELKIPRLLEPEDAWRSSALYRIYMP GTVSCASYL" BASE COUNT 350 a 276 c 273 g 272 t ORIGIN 1 cggagcgcgc tcagctgcgc ccagagcctt cggccggacc tgaaaaagcg agagggagag 61 cgagcaaaag gcgcgatcca gagagccagg caagcggggc gccgacctcg ggcggccccg 121 gcccgcgccc ttgcccctcg gccgggcgga cgttcacttc ttcaactgag atggacatga 181 tataatctcc attgagtcaa agaatggcat ctagtcctga gcttcccacc gaagatgaac 241 agggttcctg gggcatcgac gatctccata tttcattgca agctgaacag gaagacaccc 301 agaagaaagc cttcacgtgc tggataaact cacagttggc caggcacact tctccctcag 361 ttatatccga cctattcaca gacattaaaa aggggcatgt cctcctggat ctgctagaag 421 tactttctgg gcaacagttg cctcgggata aaggatctaa taccttccag tgtagaatca 481 atatagaaca tgccttgaca ttcctaagaa accgatcaat taagctaata aatattcatg 541 ttactgatat cattgatgga aacccatcca ttatccttgg cctaatttgg acaattatcc 601 tgcactttca tattgagaag cttgcccaga ctctttcttg caattacaat cagccttccc 661 tggatgatgt gagtgtggtt gactcatctc ctgcctcaag tcctccagct aagaaatgct 721 ctaaagtgca agcaagatgg caaatgtctg caagaaaggc ccttcttttg tgggctcagg 781 aacaatgcgc cacctatgag tctgtcaatg tgaccgattt taagtcaagt tggagaaatg 841 ggatggcttt tttggccatc attcatgcct tgcgaccaga cctaattgac atgaagagtg 901 tgaagcatag atccaacaaa gacaatctga gagaggcctt cagaattgca gaacaagaat 961 taaaaatccc cagattgctg gaaccagaag atgcctggag aagttctgca ctttacagaa 1021 tttatatgcc tggcacagtg tcttgtgcca gctacttgtg aggctgagat tggaggactg 1081 tttgaggcca ggagtttgag accagactgg acaacataga gagaccctgt ctaaaaaaaa 1141 taaaaaataa gataaaaaaa aaaaaaaaaa a //