LOCUS BC071834 784 bp mRNA linear HUM 12-JAN-2007 DEFINITION Homo sapiens chemokine (C-C motif) ligand 3, mRNA (cDNA clone MGC:88494 IMAGE:5935287), complete cds. ACCESSION BC071834 VERSION BC071834.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 784) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 784) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Daniel McVicar, DBS/NCI cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 58 Row: h Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4506842. FEATURES Location/Qualifiers source 1..784 /db_xref="H-InvDB:HIT000264649" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:88494 IMAGE:5935287" /tissue_type="Blood, natural killer cell" /clone_lib="NIH_MGC_106" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..784 /gene="CCL3" /gene_synonym="G0S19-1" /gene_synonym="LD78ALPHA" /gene_synonym="MIP-1-alpha" /gene_synonym="MIP1A" /db_xref="GeneID:6348" /db_xref="HGNC:HGNC:10627" /db_xref="MIM:182283" CDS 75..353 /gene="CCL3" /gene_synonym="G0S19-1" /gene_synonym="LD78ALPHA" /gene_synonym="MIP-1-alpha" /gene_synonym="MIP1A" /codon_start=1 /product="chemokine (C-C motif) ligand 3" /protein_id="AAH71834.1" /db_xref="GeneID:6348" /db_xref="HGNC:HGNC:10627" /db_xref="MIM:182283" /translation="MQVSTAALAVLLCTMALCNQFSASLAADTPTACCFSYTSRQIPQ NFIADYFETSSQCSKPGVIFLTKRSRQVCADPSEEWVQKYVSDLELSA" BASE COUNT 175 a 214 c 190 g 205 t ORIGIN 1 ggcagcagac agtggtcagt cctttcttgg ctctgctgac actcgagccc acattccgtc 61 acctgctcag aatcatgcaa gtctccactg ctgcccttgc tgtcctcctc tgcaccatgg 121 ctctctgcaa ccagttctct gcatcacttg ctgctgacac gccgaccgcc tgctgcttca 181 gctacacctc ccggcagatt ccacagaatt tcatagctga ctactttgag acgagcagcc 241 agtgctccaa gcctggtgtc atcttcctaa ccaagcgaag ccggcaggtc tgtgctgacc 301 ccagtgagga gtgggtccag aaatatgtca gcgacctgga gctgagtgcc tgaggggtcc 361 agaagcttcg aggcccagcg acctcggtgg gcccagtggg gaggagcagg agcctgagcc 421 ttgggaacat gcgtgtgacc tccacagcta cctcttctat ggactggttg ttgccaaaca 481 gccacactgt gggactcttc ttaacttaaa ttttaattta tttatactat ttagtttttg 541 taatttattt tcgatttcac agtgtgtttg tgattgtttg ctctgagagt tcccctgtcc 601 cctccccgtt ccctcacacc gcgtctggtg acaaccgagt ggctgtcatc ggcctgtgta 661 ggcagtcatg gcaccaaagc caccagactg acaaatgtgt atcggatgct tttgttcagg 721 gctgtgatcg gcctggggaa ataataaaga tgctctttta aaaggtaaaa aaaaaaaaaa 781 aaaa //