LOCUS BC071834 784 bp mRNA linear HUM 12-JAN-2007
DEFINITION Homo sapiens chemokine (C-C motif) ligand 3, mRNA (cDNA clone
MGC:88494 IMAGE:5935287), complete cds.
ACCESSION BC071834
VERSION BC071834.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 784)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 784)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Daniel McVicar, DBS/NCI
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: h Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4506842.
FEATURES Location/Qualifiers
source 1..784
/db_xref="H-InvDB:HIT000264649"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88494 IMAGE:5935287"
/tissue_type="Blood, natural killer cell"
/clone_lib="NIH_MGC_106"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..784
/gene="CCL3"
/gene_synonym="G0S19-1"
/gene_synonym="LD78ALPHA"
/gene_synonym="MIP-1-alpha"
/gene_synonym="MIP1A"
/db_xref="GeneID:6348"
/db_xref="HGNC:HGNC:10627"
/db_xref="MIM:182283"
CDS 75..353
/gene="CCL3"
/gene_synonym="G0S19-1"
/gene_synonym="LD78ALPHA"
/gene_synonym="MIP-1-alpha"
/gene_synonym="MIP1A"
/codon_start=1
/product="chemokine (C-C motif) ligand 3"
/protein_id="AAH71834.1"
/db_xref="GeneID:6348"
/db_xref="HGNC:HGNC:10627"
/db_xref="MIM:182283"
/translation="MQVSTAALAVLLCTMALCNQFSASLAADTPTACCFSYTSRQIPQ
NFIADYFETSSQCSKPGVIFLTKRSRQVCADPSEEWVQKYVSDLELSA"
BASE COUNT 175 a 214 c 190 g 205 t
ORIGIN
1 ggcagcagac agtggtcagt cctttcttgg ctctgctgac actcgagccc acattccgtc
61 acctgctcag aatcatgcaa gtctccactg ctgcccttgc tgtcctcctc tgcaccatgg
121 ctctctgcaa ccagttctct gcatcacttg ctgctgacac gccgaccgcc tgctgcttca
181 gctacacctc ccggcagatt ccacagaatt tcatagctga ctactttgag acgagcagcc
241 agtgctccaa gcctggtgtc atcttcctaa ccaagcgaag ccggcaggtc tgtgctgacc
301 ccagtgagga gtgggtccag aaatatgtca gcgacctgga gctgagtgcc tgaggggtcc
361 agaagcttcg aggcccagcg acctcggtgg gcccagtggg gaggagcagg agcctgagcc
421 ttgggaacat gcgtgtgacc tccacagcta cctcttctat ggactggttg ttgccaaaca
481 gccacactgt gggactcttc ttaacttaaa ttttaattta tttatactat ttagtttttg
541 taatttattt tcgatttcac agtgtgtttg tgattgtttg ctctgagagt tcccctgtcc
601 cctccccgtt ccctcacacc gcgtctggtg acaaccgagt ggctgtcatc ggcctgtgta
661 ggcagtcatg gcaccaaagc caccagactg acaaatgtgt atcggatgct tttgttcagg
721 gctgtgatcg gcctggggaa ataataaaga tgctctttta aaaggtaaaa aaaaaaaaaa
781 aaaa
//