LOCUS BC071609 5174 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens chromosome 1 open reading frame 96, mRNA (cDNA clone MGC:87639 IMAGE:5264741), complete cds. ACCESSION BC071609 VERSION BC071609.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5174) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 5174) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 167 Row: k Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 48675821. FEATURES Location/Qualifiers source 1..5174 /db_xref="H-InvDB:HIT000264438" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:87639 IMAGE:5264741" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..5174 /gene="C1orf96" /gene_synonym="FLJ41471" /gene_synonym="RP4-803J11.3" /db_xref="GeneID:126731" /db_xref="HGNC:HGNC:29578" CDS 125..937 /gene="C1orf96" /gene_synonym="FLJ41471" /gene_synonym="RP4-803J11.3" /codon_start=1 /product="chromosome 1 open reading frame 96" /protein_id="AAH71609.1" /db_xref="GeneID:126731" /db_xref="HGNC:HGNC:29578" /translation="MSPGSGVKSEYMKRYQEPRWEEYGPCYGELLHYRLGRRLLEQAH APWLWDDWGPAGSSEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPE EQDAEAGDAEAEDAEDAALPALPVKDVEDKPEQQTRTRETDKSPTSTEPRQQPSALFA RGNRKAVKSPQRSSSKIKENKHPFALYGWGEKQTDTGSQKTHNVCASAPVHEIHESAL RAKNRRQVEKRKLVAQRQRAHSVDVEKNRKMKASSSENPWMTEYMRCYSARA" BASE COUNT 1540 a 954 c 1091 g 1589 t ORIGIN 1 gagtgcgctt tagctgctgc gccacgcgcg cctcgggcct gggcgcagag gatcggccgg 61 gcgcggcggg aaggaggctg cgggcagcga ggagcggctg gcgctcgagg cggcggacgg 121 caccatgtcc ccggggagcg gggtgaagag cgagtacatg aagcgctacc aggagccgcg 181 ctgggaggag tacgggccgt gctacggcga gctgctgcac taccgcctag gccgccggct 241 gctggagcag gcgcacgcgc cctggctctg ggacgactgg ggcccggccg gctcctcgga 301 ggactcggcg tcgtcagagt cgtcgggcgc cgggggcccc gcaccccggt gcgccccgcc 361 ctcgcccccg ccgcccgtag agccggcgac ccaggaggag gcggaacggc gggcgcgcgg 421 ggccccggag gagcaggacg cggaggccgg ggacgcggag gccgaggacg cggaggacgc 481 ggctctgcca gcactgccag tgaaagatgt agaagataaa cctgaacaac aaaccagaac 541 aagagagact gacaaatcac ccaccagtac tgagcctcga cagcaaccaa gtgccttatt 601 tgctagagga aacaggaaag cggtcaaaag tccccaaaga tcatcgagta aaataaaaga 661 aaacaagcat ccatttgctc tttatggctg gggagaaaaa cagaccgata caggaagcca 721 gaagactcac aacgtctgtg cgtccgctcc tgtgcatgag attcatgaat cagcattacg 781 agccaagaac agaagacagg tggaaaaaag gaaactggtt gctcaaaggc agcgagctca 841 ctctgtggat gtggagaaga acagaaagat gaaggcttcc tcctcagaga acccgtggat 901 gacagaatac atgaggtgct attcggcaag agcttaaaga aacacttgcg tggacagcct 961 cttttaaaaa gtgtaaatga ctgaaaggaa aaacaaaaca aaaaccatca aaagaaacgg 1021 acacaggttt aagaaaccaa ctgattatgc aaggtttttt ttagggaatt tgtaaaagat 1081 tgttttattt tgatgaatat tggtcaccta cctcggcagt agggcagaca gttgaagcca 1141 tagacatttg gttatttatg aagataattc cctaaatctt tgatattctt ataaggtttt 1201 tgttttaaag catcttaatc ttttaagata ctgacaccaa atgcctttaa atggcaacag 1261 atgcttacag ttcagtattc ttttcataag cttaggtaga gcctattatc atcttgttct 1321 aaataacttt ccagattcca tagctataag atcattccat cctacagcat aagactcgtt 1381 ttccttatat gccgttttgt ttgtgaaaga atatcaagtc aaaaatgagt gtcagcacta 1441 ctactgattc catgtataat gaaagtagaa ctttgctagt tcctgaaaat ttttaactta 1501 tttgtatttc agttcagcag catctttatg tagattgtga tatttaagaa ttatctgggc 1561 tgggcgaggg tctctttttc tctttcagtg atcatctagg cagttattat ttaatagttt 1621 aatagctcaa gtacattcca atagacgaag tgcacacaac acaatatgtg tgtacagtag 1681 tagtaaagtt tcttttgagt agtcaaagac tcactttttt tattgccttt tttttttttt 1741 ttaaagaata catactgtgg attcagtccc ttgtcacact tgaccttttg gcatacaccc 1801 actgtggact tttgcctctt ctgtaatggc tggcaatgac atttcaaact tacaatctgg 1861 aattgcactt ggtacattgg cattgcttgt tccactggga tggggaccag tgtgaagatg 1921 cctgttagat agactgccca cccctacttt ctctttttct ttatagcact taacaataac 1981 aaagtcttga tgatgtacag tattcaaact ttaggttgaa atacgttact ctttgattcc 2041 tagccagtag atcttatcta cactttaatg ggagagaatg gtggtgtgtg agtaggcaca 2101 aatttatgta aatagtgctc cttctcttta gtatgtttgc tttgggggta gaaaaatggt 2161 tttaacaaac actggtttcc atcaaatgaa tgatgtcttc tccatcctgt ggagacaaga 2221 atctgctaga aggatatgtg ctaagttcct tataagagat aatggtgctc tgcctatgcc 2281 agcttggcac ccgaagatgt gtgagtggac gtgaggctga gtattacctt agtatttttc 2341 tctgggtctt tgggaaacca tagtcaattt ttagaacata ttgctttcat tccccataaa 2401 ctcttcacac atgataactg tttaagcttt gaaaacacat actgaagtat tgtgagctta 2461 aaaaaacttt ttaaatattt gcatagtttt gaggtgaatt tgtttcctta cagatctctc 2521 ctaatcattg agatgtatat ttcaaaagag gaaattttac atgttgtcca aaacagcctt 2581 gctagtaact ggtgaatttt ggtattaact attattaaag tctttaaacg acacaggtac 2641 ctaaagatca ccttaatgtg gcaatttgtg atggtgtagc tagctgattg tgaaaactgt 2701 tcctttaaag tcgcttcttg catgttcggt gttagtcatc cagctcaggc ttgtgttgca 2761 gctgacaatc taggaaagac ggccttagag agtggtgcag gccccacact gacggactgc 2821 cttagaaacc cgacttcctc tagactttga accgccagac ttttctcttg tttagaaaac 2881 aaacttatat ttaatgtact tactacttaa aactccagac agagatataa tgtagaaggc 2941 aaatattggc caattttttc ctctttttaa gtggaagaca aatgaacggg atttttaaag 3001 tgcttttaaa gtgcatgaat ggttaataaa tcagtatgaa ttgtaagcct tcatcttaca 3061 tccaagtcct tagttggtta gggtttcttt tctttctttt ttaaagagtg tcaattacct 3121 tttgaacctg tgaaaatttg atagttgtta acagtctgat ggtcctaatt ctttcttttc 3181 attctagaaa tgaatgtggt tgtaatcatg ttcctaattc ttgggacaac ctgcaagaca 3241 gtgagacagt ttaaaaatta cctttcatgt tgaaaaagtc tgaaacagag aacccaatga 3301 tatttaaaat aaatgctaca taaaactctt tttaaaattt tgattttaac ttaattaaaa 3361 caatgtcata aatatgcttt ttgattttgt tactgctttt aatattaaag taatagaata 3421 ttgaagcaat attgtctagc actctgctgg acattaagtc cgcgggagga gaagtgaaca 3481 ggaatcgatt ctttgtcttt taactgccct tagttaggag atgttaaaat acttggcacc 3541 tctggttata tgtatgttat gtgtgttctc ccccctaaaa tttctaagca catttattca 3601 cttttaaaat gaatctttaa aagattatag ttagtagtta tagttaatat tctatttact 3661 tggaaaaatg tgaataaatg gatcttcaaa agattcattt taaaaatgaa taaatgtata 3721 ataggctata ggtgatctta cttgcgtatt aggtaggagg cacatattta taccatttca 3781 tatgtaatat ctttgtcatt gtgtttcatc gaagatcaat tgctagcaac ttgaagggta 3841 tttatacttg ggtcacttga actcagctga ctaaattgta agaacgagag caagcaagat 3901 ggctgttatt ggaagccata acttccagaa gataattctg cacaattcgt aagttaaaaa 3961 aaatctgtag ggtcttccac tatccttttt caggttgata atgctgttct gggcacacac 4021 tttgtaaatg gaatgttatg gtacagtcgc ctctcagtat ccatggggca ttggttccag 4081 gcctccctta ggatgccaaa ctccatggat actcaaaccc cttctataaa atggtgtagt 4141 atttgcatat atcctagaca catcctcctg tatgctttaa atcatctcta gattacttaa 4201 aatacctaat acaatgtaaa tgctctgtaa atagttgtta tactatattg tttagggaat 4261 aatgacaagg aaaaaaaagc ctgtacatgt tcagcacaag tgaaaccatc ctttttgccc 4321 ccaaatattt tcaatttgta tttggttgaa tccatggatg cagaactcac ggatacagag 4381 ggccgactgt actttcttta aagtgttcaa aagtattact agcaaagagg aggaggagca 4441 aagcatatat cagaagtaaa acaatttttc ttgttgactg ctttggtaaa aaacagtttg 4501 atggatagtt ttacatttca ctggactaga taaaaaatgg tgctaatatt tatgtagctt 4561 gatgctatag ttgctttggt atcaaactta atacctaacc catataagat ccttattata 4621 taattttgtg atcagtaaaa tgatatttta aagagtgatc ttaaaaatat gacctggtca 4681 ttgcacaacg tttgcatttg aaatgaattt ttgtactata gggtggatat ggagttattc 4741 agtgcaagtg tgtgcttaat atcaaaccct atgcaaggag ctatgtctag atttttggtc 4801 caaatttgcc tccttcaagc ctactagtgt gagatggaaa aaaatcgatt gctcttttaa 4861 tattatttcc attttgaaat tctcgacact tgaatgaagg cagtagaggc ctctttttgg 4921 atttctcttc taataacaaa actttattta gggaaggttt ccctgtgcta tcgtaagttt 4981 gttttgagca ctgcattcac tttaaaattc tggaggaaca aaggctgggc acataatcac 5041 aaagcccagg ccacacaata attcggggtt gtattttcta agaactatgt attgttttta 5101 gcttatagtt aatattgtat ttacttggaa aaatgtgaat aaagttaatt aacattacaa 5161 aaaaaaaaaa aaaa //