LOCUS BC070482 827 bp mRNA linear HUM 03-JAN-2005 DEFINITION Homo sapiens high-mobility group box 3, mRNA (cDNA clone MGC:90319 IMAGE:6140626), complete cds. ACCESSION BC070482 VERSION BC070482.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 827) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 827) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 174 Row: i Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4885420. FEATURES Location/Qualifiers source 1..827 /db_xref="H-InvDB:HIT000264356" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:90319 IMAGE:6140626" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..827 /gene="HMGB3" /gene_synonym="HMG2A" /gene_synonym="HMG4" /db_xref="GeneID:3149" /db_xref="MIM:300193" CDS 192..794 /gene="HMGB3" /gene_synonym="HMG2A" /gene_synonym="HMG4" /codon_start=1 /product="HMGB3 protein" /protein_id="AAH70482.1" /db_xref="GeneID:3149" /db_xref="MIM:300193" /translation="MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKK CSERWKTMSGKEKSKFDEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFL FCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADY KSKGKFDGAKGPAKVARKKVEEEDEEEEEEEEEEEEEEDE" BASE COUNT 252 a 202 c 228 g 145 t ORIGIN 1 cgcaccgccc gctcccgccg ccgccgccgc cgccgccgcc gccgccgcag cgcccgcaca 61 actttccggc ccgcgccgcc gtgagcgcgc cctgccgccg cctccccctg cctctactcc 121 ccattccctt cccgccccct ccgccttccc tcctgctagg cggccgggaa ggaagaagca 181 attcagtcag gatggctaaa ggtgacccca agaaaccaaa gggcaagatg tccgcttatg 241 ccttctttgt gcagacatgc agagaagaac ataagaagaa aaacccagag gtccctgtca 301 attttgcgga attttccaag aagtgctctg agaggtggaa gacgatgtcc gggaaagaga 361 aatctaaatt tgatgaaatg gcaaaggcag ataaagtgcg ctatgatcgg gaaatgaagg 421 attatggacc agctaaggga ggcaagaaga agaaggatcc taatgctccc aaaaggccac 481 cgtctggatt cttcctgttc tgttcagaat tccgccccaa gatcaaatcc acaaaccccg 541 gcatctctat tggagacgtg gcaaaaaagc tgggtgagat gtggaataat ttaaatgaca 601 gtgaaaagca gccttacatc actaaggcgg caaagctgaa ggagaagtat gagaaggatg 661 ttgctgacta taagtcgaaa ggaaagtttg atggtgcaaa gggtcctgct aaagttgccc 721 ggaaaaaggt ggaagaggaa gatgaagaag aggaggagga agaagaggag gaggaggagg 781 aggaggatga ataaagaaac tgtttatctg tcaaaaaaaa aaaaaaa //