LOCUS BC070359 725 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens defensin, beta 129, mRNA (cDNA clone MGC:88365 IMAGE:6592149), complete cds. ACCESSION BC070359 VERSION BC070359.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 725) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 725) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 57 Row: k Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 30061487. FEATURES Location/Qualifiers source 1..725 /db_xref="H-InvDB:HIT000264314" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:88365 IMAGE:6592149" /tissue_type="Testis" /clone_lib="NIH_MGC_82" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..725 /gene="DEFB129" /gene_synonym="bA530N10.3" /gene_synonym="DEFB-29" /gene_synonym="DEFB29" /gene_synonym="hBD-29" /db_xref="GeneID:140881" /db_xref="HGNC:HGNC:16218" CDS 32..583 /gene="DEFB129" /gene_synonym="bA530N10.3" /gene_synonym="DEFB-29" /gene_synonym="DEFB29" /gene_synonym="hBD-29" /codon_start=1 /product="defensin, beta 129" /protein_id="AAH70359.1" /db_xref="GeneID:140881" /db_xref="HGNC:HGNC:16218" /translation="MKLLFPIFASLMLQYQVNTEFIGLRRCLMGLGRCRDHCNVDEKE IQKCKMKKCCVGPKVVKLIKNYLQYGTPNVLNEDVQEMLKPAKNSSAVIQRKHILSVL PQIKSTSFFANTNFVIIPNATPMNSATISTMTPGQITYTATSTKSNTKESRDSATASP PPAPPPPNILPTPSLELEEAEEQ" BASE COUNT 257 a 173 c 118 g 177 t ORIGIN 1 agattcaagg cttcctctct ggcacccaac catgaagctc ctttttccta tctttgccag 61 cctcatgcta cagtaccagg tgaacacaga atttattggc ttgagacgct gtttaatggg 121 tttggggaga tgcagggatc actgcaatgt ggatgaaaaa gagatacaga aatgcaagat 181 gaaaaaatgt tgtgttggac caaaagtggt taaattgatt aaaaactacc tacaatatgg 241 aacaccaaat gtacttaatg aagacgtcca agaaatgcta aaacctgcca agaattctag 301 tgctgtgata caaagaaaac atattttatc tgttctcccc caaatcaaaa gcactagctt 361 ttttgctaat accaactttg tcatcattcc aaatgccacc cctatgaact ctgccaccat 421 cagcactatg accccaggac agatcacata cactgctact tctaccaaga gtaacaccaa 481 agaaagcaga gattctgcca ctgcctcgcc accaccagca ccacctccac caaacatact 541 gccaacacca tcactggagc tagaggaagc agaagagcag taatgtggat ctttccctta 601 aaactccaag ttcctctcta tttttgctat ctataaaatg acatagaact gtttcctctg 661 tcatcagtca ttcaataaac actgtttgag caccgaaaaa aaaaaaaaaa aaaaaaaaaa 721 aaaaa //