LOCUS BC070359 725 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens defensin, beta 129, mRNA (cDNA clone MGC:88365
IMAGE:6592149), complete cds.
ACCESSION BC070359
VERSION BC070359.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 725)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 725)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: k Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30061487.
FEATURES Location/Qualifiers
source 1..725
/db_xref="H-InvDB:HIT000264314"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88365 IMAGE:6592149"
/tissue_type="Testis"
/clone_lib="NIH_MGC_82"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..725
/gene="DEFB129"
/gene_synonym="bA530N10.3"
/gene_synonym="DEFB-29"
/gene_synonym="DEFB29"
/gene_synonym="hBD-29"
/db_xref="GeneID:140881"
/db_xref="HGNC:HGNC:16218"
CDS 32..583
/gene="DEFB129"
/gene_synonym="bA530N10.3"
/gene_synonym="DEFB-29"
/gene_synonym="DEFB29"
/gene_synonym="hBD-29"
/codon_start=1
/product="defensin, beta 129"
/protein_id="AAH70359.1"
/db_xref="GeneID:140881"
/db_xref="HGNC:HGNC:16218"
/translation="MKLLFPIFASLMLQYQVNTEFIGLRRCLMGLGRCRDHCNVDEKE
IQKCKMKKCCVGPKVVKLIKNYLQYGTPNVLNEDVQEMLKPAKNSSAVIQRKHILSVL
PQIKSTSFFANTNFVIIPNATPMNSATISTMTPGQITYTATSTKSNTKESRDSATASP
PPAPPPPNILPTPSLELEEAEEQ"
BASE COUNT 257 a 173 c 118 g 177 t
ORIGIN
1 agattcaagg cttcctctct ggcacccaac catgaagctc ctttttccta tctttgccag
61 cctcatgcta cagtaccagg tgaacacaga atttattggc ttgagacgct gtttaatggg
121 tttggggaga tgcagggatc actgcaatgt ggatgaaaaa gagatacaga aatgcaagat
181 gaaaaaatgt tgtgttggac caaaagtggt taaattgatt aaaaactacc tacaatatgg
241 aacaccaaat gtacttaatg aagacgtcca agaaatgcta aaacctgcca agaattctag
301 tgctgtgata caaagaaaac atattttatc tgttctcccc caaatcaaaa gcactagctt
361 ttttgctaat accaactttg tcatcattcc aaatgccacc cctatgaact ctgccaccat
421 cagcactatg accccaggac agatcacata cactgctact tctaccaaga gtaacaccaa
481 agaaagcaga gattctgcca ctgcctcgcc accaccagca ccacctccac caaacatact
541 gccaacacca tcactggagc tagaggaagc agaagagcag taatgtggat ctttccctta
601 aaactccaag ttcctctcta tttttgctat ctataaaatg acatagaact gtttcctctg
661 tcatcagtca ttcaataaac actgtttgag caccgaaaaa aaaaaaaaaa aaaaaaaaaa
721 aaaaa
//