LOCUS BC069000 1720 bp mRNA linear HUM 04-AUG-2008 DEFINITION Homo sapiens gasdermin D, mRNA (cDNA clone MGC:78442 IMAGE:6213121), complete cds. ACCESSION BC069000 VERSION BC069000.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1720) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1720) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-APR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 54 Row: i Column: 14. FEATURES Location/Qualifiers source 1..1720 /db_xref="H-InvDB:HIT000263184" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:78442 IMAGE:6213121" /tissue_type="Salivary gland, epidermoid carcinoma" /clone_lib="NIH_MGC_102" /lab_host="DH10B" /note="Vector: pOTB7" gene 1..1720 /gene="GSDMD" /gene_synonym="DF5L" /gene_synonym="FKSG10" /gene_synonym="GSDMDC1" /db_xref="GeneID:79792" /db_xref="HGNC:HGNC:25697" CDS 90..1544 /gene="GSDMD" /gene_synonym="DF5L" /gene_synonym="FKSG10" /gene_synonym="GSDMDC1" /codon_start=1 /product="gasdermin D" /protein_id="AAH69000.1" /db_xref="GeneID:79792" /db_xref="HGNC:HGNC:25697" /translation="MGSAFERVVRRVVQELDHGGEFIPVTSLQSSTGFQPYCLVVRKP SSSWFWKPRYKCVNLSIKDILEPDAAEPDVQRGRSFHFYDAMDGQIQGSVELAAPGQA KIAGGAAVSDSSSTSMNVYSLSVDPNTWQTLLHERHLRQPEHKVLQQLRSRGDNVYVV TEVLQTQKEVEVTRTHKREGSGRFSLPGATCLQGEGQGHLSQKKTVTIPSGSTLAFRV AQLVIDSDLDVLLFPDKKQRTFQPPATGHKRSTSEGAWPQLPSGLSMMRCLHNFLTDG VPAEGAFTEDFQGLRAEVETISKELELLDRELCQLLLEGLEGVLRDQLALRALEEALE QGQSLGPVEPLDGPAGAVLECLVLSSGMLVPELAIPVVYLLGALTMLSETQHKLLAEA LESQTLLGPLELVGSLLEQSAPWQERSTMSLPPGLLGNSWGEGAPAWVLLDECGLELG EDTPHVCWEPQAQGRMCALYASLALLSGLSQEPH" BASE COUNT 342 a 513 c 579 g 286 t ORIGIN 1 ggcacctcca gctcctgctc gccggacggc tcccagggag agcagacgcg ccagacgcgc 61 caccctcggg gcgccgacgg tcacggagca tggggtcggc ctttgagcgg gtagtccgga 121 gagtggtcca ggagctggac catggtgggg agttcatccc tgtgaccagc ctgcagagct 181 ccactggctt ccagccctac tgcctggtgg ttaggaagcc ctcaagctca tggttctgga 241 aaccccgtta taagtgtgtc aacctgtcta tcaaggacat cctggagccg gatgccgcgg 301 aaccagacgt gcagcgtggc aggagcttcc acttctacga tgccatggat gggcagatac 361 agggcagcgt ggagctggca gccccaggac aggcaaagat cgcaggcggg gccgctgtgt 421 ctgacagctc cagcacctca atgaatgtgt actcgctgag tgtggaccct aacacctggc 481 agactctgct ccatgagagg cacctgcggc agccagaaca caaagtcctg cagcagctgc 541 gcagccgcgg ggacaacgtg tacgtggtga ctgaggtgct gcagacacag aaggaggtgg 601 aagtcacgcg cacccacaag cgggagggct cgggccggtt ttccctgccc ggagccacgt 661 gcttgcaggg tgagggccag ggccatctga gccagaagaa gacggtcacc atcccctcag 721 gcagcaccct cgcattccgg gtggcccagc tggttattga ctctgacttg gacgtccttc 781 tcttcccgga taagaagcag aggaccttcc agccacccgc gacaggccac aagcgttcca 841 cgagcgaagg cgcctggcca cagctgccct ctggcctctc catgatgagg tgcctccaca 901 acttcctgac agatggggtc cctgcggagg gggcgttcac tgaagacttc cagggcctac 961 gggcagaggt ggagaccatc tccaaggaac tggagctttt ggacagagag ctgtgccagc 1021 tgctgctgga gggcctggag ggggtgctgc gggaccagct ggccctgcga gccttggagg 1081 aggcgctgga gcagggccag agccttgggc cagtggagcc cctggacggt ccagcaggtg 1141 ctgtcctgga gtgcctggtg ttgtcctccg gaatgctggt gccggaactc gctatccctg 1201 ttgtctacct gctgggggca ctgaccatgc tgagtgaaac gcagcacaag ctgctggcgg 1261 aggcgctgga gtcgcagacc ctgttggggc cgctcgagct ggtgggcagc ctcttggagc 1321 agagtgcccc gtggcaggag cgcagcacca tgtccctgcc ccccgggctc ctggggaaca 1381 gctggggcga aggagcaccg gcctgggtct tgctggacga gtgtggccta gagctggggg 1441 aggacactcc ccacgtgtgc tgggagccgc aggcccaggg ccgcatgtgt gcactctacg 1501 cctccctggc actgctatca ggactgagcc aggagcccca ctagcctgtg cccgggcatg 1561 gcctggcagc tctccagcag ggcagagtgt ttgcccacca gctgctagcc ctaggaaggc 1621 caggagccca gtagccatgt ggccagtcta ccatggggcc caggagttgg ggaaacacaa 1681 taaaggtggc atacgaagga aaaaaaaaaa aaaaaaaaaa //