LOCUS BC068200 1542 bp mRNA linear HUM 26-JUN-2007 DEFINITION Homo sapiens LIM and calponin homology domains 1, mRNA (cDNA clone IMAGE:3829654), complete cds. ACCESSION BC068200 VERSION BC068200.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1542) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1542) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 51 Row: c Column: 20 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1542 /db_xref="H-InvDB:HIT000262971" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3829654" /tissue_type="Kidney, hypernephroma" /clone_lib="NIH_MGC_58" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1542 /gene="LIMCH1" /gene_synonym="LIMCH1A" /gene_synonym="LMO7B" /db_xref="GeneID:22998" /db_xref="HGNC:HGNC:29191" CDS 179..661 /gene="LIMCH1" /gene_synonym="LIMCH1A" /gene_synonym="LMO7B" /codon_start=1 /product="LIMCH1 protein" /protein_id="AAH68200.1" /db_xref="GeneID:22998" /db_xref="HGNC:HGNC:29191" /translation="MDSERQVKVKDTDDIESPKRSIRDSGYIDCWDSERSDSLSPPRH GRDDSFDSLDSFGSRSRQTPSPDVVLRGSSDGRGSDSESDLPHRKLPDVKKDDMSARR TSHGEPKSAVPFNQYLPNKSNQTAYVPAPLRKKKAEREEYRKSWSTATSPLGGERPFR " BASE COUNT 468 a 321 c 353 g 400 t ORIGIN 1 gggggagagc aggaatttcc cttcaaggta gcaggagatg aacgcgtgct gctccaggat 61 tttacagaac tgattctgca gcaaagacaa atgttgcctg tatttgccag atagtataaa 121 caggagcaaa agttgcacag ctaaaccagg ggctcattcc caggacagac atgcagttat 181 ggattccgaa agacaagtca aggttaagga cactgatgac attgaaagtc ctaaacgcag 241 tatccgagac agtggctaca tcgactgctg ggattccgag cgcagcgact ccctctctcc 301 tcctcgccac ggcagagatg attccttcga cagcctggat tcctttggct ctcgctctcg 361 gcagacgcct tcaccagatg tagtcctcag gggaagcagc gatgggagag gaagcgactc 421 tgaatccgac ttgcctcatc ggaagctgcc agatgtgaag aaggatgaca tgtctgcacg 481 gcggacttcc catggtgagc cgaaatcagc agtgcctttt aaccagtacc tcccgaacaa 541 aagcaatcag acggcctacg tccccgcgcc tctgagaaag aagaaagcag agagagagga 601 ataccgcaag agctggagta ccgccacctc cccgctgggt ggggagaggc ccttcaggta 661 aggcctgagc accgctgccc tcttcctggc ttgggcatga gtggtttggg aactgcagct 721 cctggacagg aacgaggtta aatgaccaat tcagaacttt gatggaagat tacagatgga 781 ggtgggtggg acagatcttt ggagagagct tgtcaggaga aaatagaagc ttcgtgagtg 841 cgcctagaac agtgcctggc acacagtagg tattcagcaa ctacttgtct aaataagcag 901 atttctgaaa ccaattctgt tgataggaca ttgagagcaa atctgtcatc cttgtccttc 961 tgcggagact gcttgactcc caatcctgtc agattaggcg tagaaagatt cctatcttta 1021 tgcaaaaaga tgttttaaaa ctctaggctt aaattaactt gatataagct caaatatgtg 1081 atgcatggaa tgtggttcac aataacatat agaaatagtc ataataaatg gatttctcat 1141 ctctttagag aaacagtgtt ttaatctctg attatgcttt tgtatttatt tattcattta 1201 ttcagcaagt acttattgag catctactat atgctaggca ttggggaccc aataacaaat 1261 aaggcagagt ccctgccttc aagaatctta caataaaata aacttgtcta atagtccatc 1321 tgtactatta ttttctattg aataaagatg ttattacaat ttttaatttg ctgaacaaac 1381 taatgaaatt tacctttcca gcagaaaagg tttttgcctt tcattatcaa gtctgggata 1441 actctcaatg ttgcgggtat gatgcattgt atgaattaaa tggctgcgtt gaattttctt 1501 cacattatca gcaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa //