LOCUS BC068000 2279 bp mRNA linear HUM 30-JUN-2004 DEFINITION Homo sapiens chromodomain helicase DNA binding protein 7, mRNA (cDNA clone IMAGE:6010918), partial cds. ACCESSION BC068000 VERSION BC068000.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2279) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2279) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (22-MAR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP/Gazdar cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 140 Row: a Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: GenomeScan gene prediction. FEATURES Location/Qualifiers source 1..2279 /db_xref="H-InvDB:HIT000262876" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6010918" /tissue_type="Lung, large cell carcinoma" /clone_lib="NIH_MGC_68" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..>2279 /gene="CHD7" /gene_synonym="FLJ20357" /gene_synonym="FLJ20361" /gene_synonym="KIAA1416" /db_xref="GeneID:55636" CDS 496..>2279 /gene="CHD7" /gene_synonym="FLJ20357" /gene_synonym="FLJ20361" /gene_synonym="KIAA1416" /codon_start=1 /product="CHD7 protein" /protein_id="AAH68000.1" /db_xref="GeneID:55636" /translation="MSLFGEDGNIFSEGLEGLGECGYPENPVNPMGQQMPIDQGFASL QPSLHHPSTNQNQTKLTHFDHYNQYEQQKMHLMDQPNRMMSNTPGNGLASPHSQYHTP PVPQVPHGGSGGGQMGVYPGMQNERHGQSFVDSSSMWGPRAVQVPDQIRAPYQQQQPQ PQPPQPAPSGPPAQGHPQHMQQMGSYMARGDFSMQQHGQPQQRMSQFSQGQEGLNQGN PFIATSGPGHLSHVPQQSPSMAPSLRHSVQQFHHHPSTALHGESVAHSPRFSPNPPQQ GAVRPQTLNFSSRSQTVPSPTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPM NQSVPRYPNAVGFPSNSGQGLMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSP MKAMSNPAGTPPPQVRPGSAGIPMEVGSYPNMPHPQPSHQPPGAMGIGQRNMGPRNMQ QSRPFIGMSSAPRELTGHMRPNGCPGVGLGDPQAIQERLIPGQQHPGQQPSFQQLPTC PPLQPHPGLHHQSSPPHPHHQPWAQLHPSPQNTPQKVPVHQHSPSEPFLEKPVPDMTQ VSGPNAQLVKSDDYLPSIEQQPQQKKKK" BASE COUNT 594 a 681 c 557 g 447 t ORIGIN 1 gcggcggcgg cagcggcggc ggcggcggcg gcgcgggggt tgagtcgtgg tggtgcggac 61 gcgctcgtgc tcgggaacta tcggattaaa cttgaatcga gtgaaattac acaaaggagc 121 gccgcggagg aggcggcccg gggacccgga caccctgaaa ctcaccagag acccgttcgc 181 ccccggccaa ctccgtgccc gtggattcag ccccctggcc gcagctgccg agccaactcc 241 ggagcccgct ctgcgttttg ttttcccctc ggcactaggc agcggaggag cccgaccgac 301 ccggacctat atccagactt tgcctgacac tgcagggtcc aagagaatta aagaaatatg 361 gaatgacatg aagaagatta gttaaggatt ataggctttg agggcaaaca cctcagtgaa 421 gtgaagcaca ggcaagctcc tgagctgtgg tttggaggag ccgtgtgttg gaagaagatg 481 gcagatccag gaatgatgag tctttttggc gaggatggga atattttcag tgaaggtctt 541 gaaggcctcg gagaatgtgg ttacccggaa aatccagtaa atcctatggg tcagcaaatg 601 ccaatagacc aaggctttgc ctctttacag ccatcccttc atcatccttc aactaatcaa 661 aatcaaacaa agctgacaca ttttgatcac tataatcagt atgaacaaca aaagatgcat 721 ctgatggatc agccgaacag aatgatgagc aacacccctg ggaacggact cgcgtctccg 781 cactcgcagt atcacacccc tcccgttcct caggtgcccc atggtggcag tggtggcggt 841 cagatgggtg tctaccctgg catgcagaat gagaggcatg ggcaatcctt tgtggacagc 901 agctccatgt ggggccccag ggctgttcag gtaccagacc agatacgagc cccctaccag 961 cagcagcagc cacagccgca gccaccgcag ccggctccgt cggggccccc tgcacagggc 1021 caccctcagc acatgcagca gatgggcagc tatatggcac gtggggattt ttccatgcag 1081 cagcatggtc agccacagca gaggatgagc cagttttccc aaggccaaga gggcctcaat 1141 cagggaaatc cttttattgc cacctcagga cctggccact tgtcccacgt gccccagcag 1201 agtcccagca tggcaccttc cttgcgtcac tcggtgcagc agttccatca ccacccctct 1261 actgctctcc atggagaatc cgttgcccac agtcccagat tctccccgaa tcctccccaa 1321 caaggggctg ttaggccgca aacccttaac tttagttctc ggagccagac agtcccctct 1381 cctactataa acaactcagg gcagtattct cgatatcctt acagtaacct aaatcaggga 1441 ttagttaaca atacagggat gaatcaaaat ttaggcctta caaataatac tccaatgaat 1501 cagtccgtac caagataccc caatgctgta ggattcccat caaacagtgg tcaaggacta 1561 atgcaccagc agcccatcca ccccagtggc tcacttaacc aaatgaacac acaaactatg 1621 catccttcac agcctcaggg aacttatgcc tctccacctc ccatgtcacc catgaaagca 1681 atgagtaatc cagcaggcac tcctcctcca caagtcaggc cgggaagtgc tgggatacca 1741 atggaagttg gcagttatcc aaatatgccc catcctcagc catctcacca gccccctggt 1801 gccatgggaa tcggacagag gaatatgggc cccagaaaca tgcagcagtc tcgtccattt 1861 ataggcatgt cctcggcacc aagggaattg actgggcaca tgaggccaaa tggttgtcct 1921 ggtgttggcc ttggagaccc acaagcaatc caggaacgac tgatacctgg ccaacaacat 1981 cctggtcaac agccatcttt tcagcagttg ccaacctgtc ctccactgca gcctcacccg 2041 ggcttgcacc accagtcttc acctccacac cctcatcacc agccttgggc acagctccac 2101 ccatcacccc agaacacccc gcagaaagtg cctgtgcatc agcattcccc gtcggagccc 2161 tttctagaga aaccagtgcc ggatatgact caggttagtg gaccgaatgc tcagctagtg 2221 aagagtgatg attacctgcc atcaatagaa cagcagccac aacaaaaaaa aaaaaaaaa //