LOCUS BC067848 2217 bp mRNA linear HUM 01-FEB-2007 DEFINITION Homo sapiens karyopherin alpha 2 (RAG cohort 1, importin alpha 1), mRNA (cDNA clone MGC:87448 IMAGE:4825235), complete cds. ACCESSION BC067848 VERSION BC067848.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2217) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2217) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-MAR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 167 Row: f Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 62388891. FEATURES Location/Qualifiers source 1..2217 /db_xref="H-InvDB:HIT000262816_03" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:87448 IMAGE:4825235" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2217 /gene="KPNA2" /gene_synonym="IPOA1" /gene_synonym="QIP2" /gene_synonym="SRP1alpha" /db_xref="GeneID:3838" /db_xref="HGNC:HGNC:6395" /db_xref="MIM:600685" CDS 362..1951 /gene="KPNA2" /gene_synonym="IPOA1" /gene_synonym="QIP2" /gene_synonym="SRP1alpha" /codon_start=1 /product="karyopherin alpha 2 (RAG cohort 1, importin alpha 1)" /protein_id="AAH67848.1" /db_xref="GeneID:3838" /db_xref="HGNC:HGNC:6395" /db_xref="MIM:600685" /translation="MSTNENANTPAARLHRFKNKGKDSTEMRRRRIEVNVELRKAKKD DQMLKRRNVSSFPDDATSPLQENRNNQGTVNWSVDDIVKGINSSNVENQLQATQAARK LLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVD GGAIRAFISLLASPHAHISEQDVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDM SSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAIS YLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDA GALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFK TQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQA AEKLGETEKLSIMIEECGGLDKIEALQNHENESVYKASLSLIEKYFSVEEEEDQNVVP ETTSEGYTFQVQDGAPGTFNF" BASE COUNT 644 a 474 c 482 g 617 t ORIGIN 1 gacacctagg ccccgggggt ggctctgcca ccaagtcgta ggcgagcgta atgaaagcaa 61 agatagcaaa ttgtaaggag ggctttgact tttgtcatct tctgaatgac gcacagctga 121 tgtcatccta attaagcgca ttcactccta gtctctggaa atgcaaatca aatatgcgag 181 atgcggcact gcatttttaa tgttgaccat aatgtaatga tgaagcaaat ttttatttaa 241 ttttcgagtc tgcacctatt ttggccaagt aaagacagta aaatagggag agcctcctga 301 ggatctgaat ttattgccct ggcacataat ttttagctct ttctcccttt gtctcataac 361 catgtccacc aacgagaatg ctaatacacc agctgcccgt cttcacagat tcaagaacaa 421 gggaaaagac agtacagaaa tgaggcgtcg cagaatagag gtcaatgtgg agctgaggaa 481 agctaagaag gatgaccaga tgctgaagag gagaaatgta agctcatttc ctgatgatgc 541 tacttctccg ctgcaggaaa accgcaacaa ccagggcact gtaaattggt ctgttgatga 601 cattgtcaaa ggcataaata gcagcaatgt ggaaaatcag ctccaagcta ctcaagctgc 661 caggaaacta ctttccagag aaaaacagcc ccccatagac aacataatcc gggctggttt 721 gattccgaaa tttgtgtcct tcttgggcag aactgattgt agtcccattc agtttgaatc 781 tgcttgggca ctcactaaca ttgcttctgg gacatcagaa caaaccaagg ctgtggtaga 841 tggaggtgcc atccgagcat tcatttctct gttggcatct ccccatgctc acatcagtga 901 acaagatgtc tgggctctag gaaacattgc aggtgatggc tcagtgttcc gagacttggt 961 tattaagtac ggtgcagttg acccactgtt ggctctcctt gcagttcctg atatgtcatc 1021 tttagcatgt ggctacttac gtaatcttac ctggacactt tctaatcttt gccgcaacaa 1081 gaatcctgca cccccgatag atgctgttga gcagattctt cctaccttag ttcggctcct 1141 gcatcatgat gatccagaag tgttagcaga tacctgctgg gctatttcct accttactga 1201 tggtccaaat gaacgaattg gcatggtggt gaaaacagga gttgtgcccc aacttgtgaa 1261 gcttctagga gcttctgaat tgccaattgt gactcctgcc ctaagagcca tagggaatat 1321 tgtcactggt acagatgaac agactcaggt tgtgattgat gcaggagcac tcgccgtctt 1381 tcccagcctg ctcaccaacc ccaaaactaa cattcagaag gaagctacgt ggacaatgtc 1441 aaacatcaca gccggccgcc aggaccagat acagcaagtt gtgaatcatg gattagtccc 1501 attccttgtc agtgttctct ctaaggcaga ttttaagaca caaaaggaag ctgtgtgggc 1561 cgtgaccaac tataccagtg gtggaacagt tgaacagatt gtgtaccttg ttcactgtgg 1621 cataatagaa ccgttgatga acctcttaac tgcaaaagat accaagatta ttctggttat 1681 cctggatgcc atttcaaata tctttcaggc tgctgagaaa ctaggtgaaa ctgagaaact 1741 tagtataatg attgaagaat gtggaggctt agacaaaatt gaagctctac aaaaccatga 1801 aaatgagtct gtgtataagg cttcgttaag cttaattgag aagtatttct ctgtagagga 1861 agaggaagat caaaacgttg taccagaaac tacctctgaa ggctacactt tccaagttca 1921 ggatggggct cctgggacct ttaactttta gatcatgtag ctgagacata aatttgttgt 1981 gtactacgtt tggtattttg tcttattgtt tctctactaa gaactctttc ttaaatgtgg 2041 tttgttactg tagcactttt tacactgaaa ctatacttga acagttccaa ctgtacatac 2101 atactgtatg aagcttgtcc tctgactagg tttctaattt ctatgtggaa tttcctatct 2161 tgcagcatcc tgtaaataaa cattcaagtc cacccttaaa gaaaaaaaaa aaaaaaa //