LOCUS BC067848 2217 bp mRNA linear HUM 01-FEB-2007
DEFINITION Homo sapiens karyopherin alpha 2 (RAG cohort 1, importin alpha 1),
mRNA (cDNA clone MGC:87448 IMAGE:4825235), complete cds.
ACCESSION BC067848
VERSION BC067848.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2217)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2217)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: f Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62388891.
FEATURES Location/Qualifiers
source 1..2217
/db_xref="H-InvDB:HIT000262816_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87448 IMAGE:4825235"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2217
/gene="KPNA2"
/gene_synonym="IPOA1"
/gene_synonym="QIP2"
/gene_synonym="SRP1alpha"
/db_xref="GeneID:3838"
/db_xref="HGNC:HGNC:6395"
/db_xref="MIM:600685"
CDS 362..1951
/gene="KPNA2"
/gene_synonym="IPOA1"
/gene_synonym="QIP2"
/gene_synonym="SRP1alpha"
/codon_start=1
/product="karyopherin alpha 2 (RAG cohort 1, importin
alpha 1)"
/protein_id="AAH67848.1"
/db_xref="GeneID:3838"
/db_xref="HGNC:HGNC:6395"
/db_xref="MIM:600685"
/translation="MSTNENANTPAARLHRFKNKGKDSTEMRRRRIEVNVELRKAKKD
DQMLKRRNVSSFPDDATSPLQENRNNQGTVNWSVDDIVKGINSSNVENQLQATQAARK
LLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVD
GGAIRAFISLLASPHAHISEQDVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDM
SSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAIS
YLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDA
GALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFK
TQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQA
AEKLGETEKLSIMIEECGGLDKIEALQNHENESVYKASLSLIEKYFSVEEEEDQNVVP
ETTSEGYTFQVQDGAPGTFNF"
BASE COUNT 644 a 474 c 482 g 617 t
ORIGIN
1 gacacctagg ccccgggggt ggctctgcca ccaagtcgta ggcgagcgta atgaaagcaa
61 agatagcaaa ttgtaaggag ggctttgact tttgtcatct tctgaatgac gcacagctga
121 tgtcatccta attaagcgca ttcactccta gtctctggaa atgcaaatca aatatgcgag
181 atgcggcact gcatttttaa tgttgaccat aatgtaatga tgaagcaaat ttttatttaa
241 ttttcgagtc tgcacctatt ttggccaagt aaagacagta aaatagggag agcctcctga
301 ggatctgaat ttattgccct ggcacataat ttttagctct ttctcccttt gtctcataac
361 catgtccacc aacgagaatg ctaatacacc agctgcccgt cttcacagat tcaagaacaa
421 gggaaaagac agtacagaaa tgaggcgtcg cagaatagag gtcaatgtgg agctgaggaa
481 agctaagaag gatgaccaga tgctgaagag gagaaatgta agctcatttc ctgatgatgc
541 tacttctccg ctgcaggaaa accgcaacaa ccagggcact gtaaattggt ctgttgatga
601 cattgtcaaa ggcataaata gcagcaatgt ggaaaatcag ctccaagcta ctcaagctgc
661 caggaaacta ctttccagag aaaaacagcc ccccatagac aacataatcc gggctggttt
721 gattccgaaa tttgtgtcct tcttgggcag aactgattgt agtcccattc agtttgaatc
781 tgcttgggca ctcactaaca ttgcttctgg gacatcagaa caaaccaagg ctgtggtaga
841 tggaggtgcc atccgagcat tcatttctct gttggcatct ccccatgctc acatcagtga
901 acaagatgtc tgggctctag gaaacattgc aggtgatggc tcagtgttcc gagacttggt
961 tattaagtac ggtgcagttg acccactgtt ggctctcctt gcagttcctg atatgtcatc
1021 tttagcatgt ggctacttac gtaatcttac ctggacactt tctaatcttt gccgcaacaa
1081 gaatcctgca cccccgatag atgctgttga gcagattctt cctaccttag ttcggctcct
1141 gcatcatgat gatccagaag tgttagcaga tacctgctgg gctatttcct accttactga
1201 tggtccaaat gaacgaattg gcatggtggt gaaaacagga gttgtgcccc aacttgtgaa
1261 gcttctagga gcttctgaat tgccaattgt gactcctgcc ctaagagcca tagggaatat
1321 tgtcactggt acagatgaac agactcaggt tgtgattgat gcaggagcac tcgccgtctt
1381 tcccagcctg ctcaccaacc ccaaaactaa cattcagaag gaagctacgt ggacaatgtc
1441 aaacatcaca gccggccgcc aggaccagat acagcaagtt gtgaatcatg gattagtccc
1501 attccttgtc agtgttctct ctaaggcaga ttttaagaca caaaaggaag ctgtgtgggc
1561 cgtgaccaac tataccagtg gtggaacagt tgaacagatt gtgtaccttg ttcactgtgg
1621 cataatagaa ccgttgatga acctcttaac tgcaaaagat accaagatta ttctggttat
1681 cctggatgcc atttcaaata tctttcaggc tgctgagaaa ctaggtgaaa ctgagaaact
1741 tagtataatg attgaagaat gtggaggctt agacaaaatt gaagctctac aaaaccatga
1801 aaatgagtct gtgtataagg cttcgttaag cttaattgag aagtatttct ctgtagagga
1861 agaggaagat caaaacgttg taccagaaac tacctctgaa ggctacactt tccaagttca
1921 ggatggggct cctgggacct ttaactttta gatcatgtag ctgagacata aatttgttgt
1981 gtactacgtt tggtattttg tcttattgtt tctctactaa gaactctttc ttaaatgtgg
2041 tttgttactg tagcactttt tacactgaaa ctatacttga acagttccaa ctgtacatac
2101 atactgtatg aagcttgtcc tctgactagg tttctaattt ctatgtggaa tttcctatct
2161 tgcagcatcc tgtaaataaa cattcaagtc cacccttaaa gaaaaaaaaa aaaaaaa
//