LOCUS BC067822 1677 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens 3-hydroxyisobutyryl-Coenzyme A hydrolase, mRNA (cDNA
clone MGC:87353 IMAGE:5266813), complete cds.
ACCESSION BC067822
VERSION BC067822.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1677)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1677)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: l Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37594468.
FEATURES Location/Qualifiers
source 1..1677
/db_xref="H-InvDB:HIT000262790"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87353 IMAGE:5266813"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1677
/gene="HIBCH"
/gene_synonym="HIBYL-COA-H"
/db_xref="GeneID:26275"
/db_xref="HGNC:HGNC:4908"
CDS 25..1185
/gene="HIBCH"
/gene_synonym="HIBYL-COA-H"
/codon_start=1
/product="3-hydroxyisobutyryl-Coenzyme A hydrolase"
/protein_id="AAH67822.1"
/db_xref="GeneID:26275"
/db_xref="HGNC:HGNC:4908"
/translation="MGQREMWRLMSRFNAFKRTNTILHHLRMSKHTDAAEEVLLGKKG
CTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRV
ISEAEKAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVAT
EKCLFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYRAGIATHFVD
SEKLAMLEEDLLALKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINSCFSANT
VEEIIENLQQDGSSFALEQLKVINKMSPTSLKITLRQLMEGSSKTLQEVLTMEYRLSQ
ACMRGHDFHEGVRAVLIDKDQSPKWKPADLKEVTEEDLNNHFKSLGSSDLKF"
BASE COUNT 552 a 263 c 376 g 486 t
ORIGIN
1 gctttagctt cggagtgttt ggcgatgggg cagcgcgaga tgtggaggct catgtcgagg
61 tttaatgcat tcaaaaggac taataccata ctgcaccatt tgagaatgtc caagcacaca
121 gatgcagcag aagaggtgct attgggaaaa aaaggttgca cgggagtcat aacactaaac
181 agaccaaagt tcctcaatgc actgactctt aatatgattc ggcagattta tccacagcta
241 aagaagtggg aacaagatcc tgaaactttc ctgatcatta taaagggagc aggaggaaag
301 gctttctgtg ccgggggtga tatcagagtg atctcggaag ctgaaaaggc aaaacagaag
361 atagctccag ttttcttcag agaagaatat atgctgaata atgctgttgg ttcttgccag
421 aaaccttatg ttgcacttat tcatggaatt acaatgggtg ggggagttgg tctctcagtc
481 catgggcaat ttcgagtggc tacagaaaag tgtctttttg ctatgccaga aactgcaata
541 ggactgttcc ctgatgtggg tggaggttat ttcttgccac gactccaagg aaaacttggt
601 tacttccttg cattaacagg attcagacta aaaggaagag atgtgtacag agcaggaatt
661 gctacacact ttgtagattc tgaaaagttg gccatgttag aggaagattt gttagccttg
721 aaatctcctt caaaagaaaa tattgcatct gtcttagaaa attaccatac agagtctaag
781 attgatcgag acaagtcttt tatacttgag gaacacatgg acaaaataaa cagttgtttt
841 tcagccaata ctgtggaaga aattattgaa aacttacagc aagatggttc atcttttgcc
901 ctagagcaat tgaaggtaat taataaaatg tctccaacat ctctaaagat cacactaagg
961 caactcatgg aggggtcttc aaagaccttg caagaagtac taactatgga gtatcggcta
1021 agtcaagctt gtatgagagg tcatgacttt catgaaggcg ttagagctgt tttaattgat
1081 aaagaccaga gtccaaaatg gaaaccagct gatctaaaag aagttactga ggaagatttg
1141 aataatcact ttaagtcttt gggaagcagt gatttgaaat tttgaagtga caggctttta
1201 aggtatattt tgtagcatgg gttggcaatc tacagcatgt gggccaaatc cagcctgctg
1261 cctgttttta tataccctgt aagctaagaa tggtttccgc atttttaaat ggttgggaaa
1321 agaaatcaaa gactaatatt tcatgacgtg aaaattatca gaattcacaa ataaagcttt
1381 attggaacta gctatactca tctgtttata tattatctgt ggctgctttg aaatgagtag
1441 ttgcaataga gatggtaaag cctacaaagc ctaattattt actgtctggt ttttgtcaga
1501 aaaaagtttg tcaatccttg ttttagaaga tggaaaaatg tgaagatctt tagagattct
1561 cttgagtggt atatctaatt gaaatgggat ctttgtttgg cttgtatgtt gatgaaatca
1621 acttaggtat acaatataaa aaataaagac cctgaaaatt gaaaaaaaaa aaaaaaa
//