LOCUS BC067523 1490 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens matrix metallopeptidase 13 (collagenase 3), mRNA (cDNA clone MGC:79423 IMAGE:7002185), complete cds. ACCESSION BC067523 VERSION BC067523.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1490) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1490) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-MAR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Narayan Bhat cDNA Library Preparation: Bhat Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 172 Row: i Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 13027796. FEATURES Location/Qualifiers source 1..1490 /db_xref="H-InvDB:HIT000262681" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:79423 IMAGE:7002185" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_195" /lab_host="DH10B" /note="Vector: pDNR-Dual" gene 1..1490 /gene="MMP13" /gene_synonym="CLG3" /db_xref="GeneID:4322" /db_xref="HGNC:HGNC:7159" /db_xref="MIM:600108" CDS 9..1424 /gene="MMP13" /gene_synonym="CLG3" /codon_start=1 /product="matrix metallopeptidase 13 (collagenase 3)" /protein_id="AAH67523.1" /db_xref="GeneID:4322" /db_xref="HGNC:HGNC:7159" /db_xref="MIM:600108" /translation="MHPGVLAAFLFLSWTHCRALPLPSGGDEDDLSEEDLQFAERYLR SYYHPTNLAGILKENAASSMTERLREMQSFFGLEVTGKLDDNTLDVMKKPRCGVPDVG EYNVFPRTLKWSKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTRLHDGI ADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWTSSSKGYNLFL VAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPK HLKTPDKCDPSLSLDAITSLRGETMIFKDRFFWRLHPQQVDAELFLTKSFWPELPNRI DAAYEHPSHDLIFIFRGRKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTG KTLLFSGNQVWRYDDTNHIMDKDYPRLIEEDFPGIGDKVDAVYEKNGYIYFFNGPIQF EYSIWSNRIVRVMPANSILWC" BASE COUNT 410 a 337 c 323 g 420 t ORIGIN 1 cattcaagat gcatccaggg gtcctggctg ccttcctctt cttgagctgg actcattgtc 61 gggccctgcc ccttcccagt ggtggtgatg aagatgattt gtctgaggaa gacctccagt 121 ttgcagagcg ctacctgaga tcatactacc atcctacaaa tctcgcggga atcctgaagg 181 agaatgcagc aagctccatg actgagaggc tccgagaaat gcagtctttc ttcggcttag 241 aggtgactgg caaacttgac gataacacct tagatgtcat gaaaaagcca agatgcgggg 301 ttcctgatgt gggtgaatac aatgttttcc ctcgaactct taaatggtcc aaaatgaatt 361 taacctacag aattgtgaat tacacccctg atatgactca ttctgaagtc gaaaaggcat 421 tcaaaaaagc cttcaaagtt tggtccgatg taactcctct gaattttacc agacttcacg 481 atggcattgc tgacatcatg atctcttttg gaattaagga gcatggcgac ttctacccat 541 ttgatgggcc ctctggcctg ctggctcatg cttttcctcc tgggccaaat tatggaggag 601 atgcccattt tgatgatgat gaaacctgga caagtagttc caaaggctac aacttgtttc 661 ttgttgctgc gcatgagttc ggccactcct taggtcttga ccactccaag gaccctggag 721 cactcatgtt tcctatctac acctacaccg gcaaaagcca ctttatgctt cctgatgacg 781 atgtacaagg gatccagtct ctctatggtc caggagatga agaccccaac cctaaacatc 841 taaaaacgcc agacaaatgt gacccttcct tatcccttga tgccattacc agtctccgag 901 gagaaacaat gatctttaaa gacagattct tctggcgcct gcatcctcag caggttgatg 961 cggagctgtt tttaacgaaa tcattttggc cagaacttcc caaccgtatt gatgctgcat 1021 atgagcaccc ttctcatgac ctcatcttca tcttcagagg tagaaaattt tgggctctta 1081 atggttatga cattctggaa ggttatccca aaaaaatatc tgaactgggt cttccaaaag 1141 aagttaagaa gataagtgca gctgttcact ttgaggatac aggcaagact ctcctgttct 1201 caggaaacca ggtctggaga tatgatgata ctaaccatat tatggataaa gactatccga 1261 gactaataga agaagacttc ccgggaattg gtgataaagt agatgctgtc tatgagaaaa 1321 atggttatat ctattttttc aacggaccca tacagtttga atacagcatc tggagtaacc 1381 gtattgttcg cgtcatgcca gcaaattcca ttttgtggtg ttaagtgtct ttttaaaaat 1441 tgttatttaa atcctgaaga gcatttgggg taatacttcc agaagtgcgg //