LOCUS BC066931 2606 bp mRNA linear HUM 06-JUN-2006 DEFINITION Homo sapiens SET domain containing 3, mRNA (cDNA clone IMAGE:4826483), complete cds. ACCESSION BC066931 VERSION BC066931.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2606) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2606) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-MAR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 167 Row: g Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 40068482 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..2606 /db_xref="H-InvDB:HIT000262352" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4826483" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2606 /gene="SETD3" /gene_synonym="FLJ23027" /db_xref="GeneID:84193" /db_xref="HGNC:HGNC:20493" CDS 72..950 /gene="SETD3" /gene_synonym="FLJ23027" /codon_start=1 /product="SETD3 protein" /protein_id="AAH66931.1" /db_xref="GeneID:84193" /db_xref="HGNC:HGNC:20493" /translation="MGKKSRVKTQKSGTGATATVSPKEILNLTSELLQKCSSPAPGPG KEWEEYVQIRTLVEKIRKKQKGLSVTFDGKREDYFPDLMKWASENGASVEGFEMVNFK EEGFGLRATRDIKAEELFLWVPRKLLMTVESAKNSVLGPLYSQDRILQAMGNIALAFH LLCERASPNSFWQPYIQTLPSEYDTPLYFEEDEVRYLQSTQAIHDVFSQYKNTARQYA YFYKVIQTHPHANKLPLKDSFTYEDYRWAVSSVMTRQNQIPTEDGSRVTLALIPLWDM CNHTNGLVTTSSPVLC" BASE COUNT 727 a 555 c 540 g 784 t ORIGIN 1 gatgcggacg gcggggtccg ggccggagta cgtcgttccc gctgcgctag gggaagcggg 61 cagtcagaaa aatgggtaag aagagtcgag taaaaactca gaaatctggc actggtgcta 121 cagcaactgt gtcaccaaag gaaatcttga acctgaccag tgagctgctg cagaaatgca 181 gcagtccggc gcctggccca ggaaaagagt gggaagagta tgtgcagatc cggactctgg 241 ttgagaaaat acggaaaaag caaaaaggtc tgtccgttac ttttgatgga aaaagagaag 301 attactttcc tgatctaatg aaatgggcct ctgaaaatgg ggcttctgtc gagggttttg 361 aaatggttaa cttcaaagaa gagggctttg gtttgagagc aacaagagat atcaaggcag 421 aagaattgtt tttatgggtt ccacgaaaat tgctaatgac tgttgaatct gctaaaaatt 481 cagtgttggg gcccttatat tctcaagacc gaatccttca agccatggga aacatcgcac 541 tggcctttca tttgctgtgt gagcgagcca gccctaactc cttctggcag ccctatattc 601 aaaccctccc cagtgaatat gacactcctc tctactttga agaagatgaa gttcggtatc 661 ttcagtccac acaagctata catgatgtct tcagccagta taaaaacaca gctcgacagt 721 acgcctactt ctataaagtc atccagaccc atcctcatgc caacaaacta cccttgaagg 781 attctttcac ttacgaggac tacaggtggg cagtctcttc tgttatgacg aggcaaaacc 841 aaattcccac agaggatggt tcccgcgtga ccctggctct gattccttta tgggatatgt 901 gtaaccacac caacggcctg gtaacgacct cttcccctgt gttgtgttga atctgggagg 961 ctgttgttgc taagctttgg gagggggctg ttattccacc tacccatcgt actccccccg 1021 ttgcctccct ccaaaaggaa caaacaaaac cgaaccggcc actcctcccc accgcccaca 1081 gatagaagct ggtatttttc ttttactgca ttgactaata ctgaaaactg ggagcttgaa 1141 tcttatacca ttttcaaaag ccacagtgaa ctacatgtgt ttgctaagcc ataattccag 1201 cctcaacatt cattttctta tcttattgta ccacagacta aaccaaagtt tctttttact 1261 tattctcttt aaaatgctca tttattgggg aaaaaaaatc atatttctca ttttcccttt 1321 tgtgtcttct tttctttgct gacactctgt ttccagttct gtacctttga ttctttcttg 1381 tccccggtcc cttcccctga tgggctgacg aatccctggc catgtttatg aacctgtgtt 1441 tgttacttgc tttccctggt gctgtggggc gggaggaggg ggctcatgcc ttgggctcct 1501 cgcccttgac tgcaggagtc agctggcatc atcatacctg ggaagcctgg ggaggaggaa 1561 gttgtattat tatggtcccc cacagctggg aagaggtgga ggcaggctct gtttctccac 1621 attcttcgga ttccgggcag cagcataggt gaagcgctct gtgctctgtg agagggttgt 1681 ctgataaaga tttcctgata ttagtaggca gaaataagat acatttcaga tcattttgaa 1741 atatcatact ttatactagt atactgtttg attaggtttt atgttcatct tttctctgtc 1801 agctttcctt gttattagca gtattataaa tagaataaag aaatgccgtg aatgattatt 1861 tcacattgaa ttccctggaa tggccagaac acacgtagtg tgcgccagac actgaagaca 1921 gaatatccta gtgctaattt gggaaggtct agcaacaagt atgttcttga atcttaaaag 1981 tatttaaatt gtggcaagaa agaatagttc catttttata attacatttt ggccttaatt 2041 tagatatggt taatttaatt agtaatgaat actaaaacat aatagcatgt tttataactt 2101 attttcatta atgaatataa ttttacattt tttgttttgt ttttcttcag agttatttta 2161 aattgacggt aagcttgaaa tttaagaaat cttcaaatag cttttaatat ctgactgtag 2221 tgtttttctt cttctttttt tgaatgagat catttgttcc caaactcaat tgattattag 2281 agttcttttt aataaaatta aagcaataat gcttggcttt actctaaaca aacaaaaaga 2341 attaacccag gaacctctgt agcaaggtga gcagtgccct acccccagcc ccacagtcca 2401 cctgatggtg ttgaggccgc caccaggcca ccgtggtccc tagcgaagct tccatccatt 2461 ggcacctcac acactcatct gcacattggt ttttgtttag cttccatgta aatgggataa 2521 aacaattcct ttttccctac caagtgttaa aaaaaaaaga ggtttatctc aaaataaaga 2581 aattgatgac aaaaaaaaaa aaaaaa //