LOCUS       BC066332                 908 bp    mRNA    linear   HUM 03-NOV-2006
DEFINITION  Homo sapiens HD domain containing 2, mRNA (cDNA clone MGC:87330
            IMAGE:5294646), complete cds.
ACCESSION   BC066332
VERSION     BC066332.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 908)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 908)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (03-FEB-2004) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 168 Row: c Column: 5
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 7705623.
FEATURES             Location/Qualifiers
     source          1..908
                     /db_xref="H-InvDB:HIT000262223"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:87330 IMAGE:5294646"
                     /tissue_type="Brain, hypothalamus"
                     /clone_lib="NIH_MGC_96"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..908
                     /gene="HDDC2"
                     /gene_synonym="CGI-130"
                     /gene_synonym="dJ167O5.2"
                     /gene_synonym="NS5ATP2"
                     /db_xref="GeneID:51020"
                     /db_xref="HGNC:HGNC:21078"
     CDS             19..633
                     /gene="HDDC2"
                     /gene_synonym="CGI-130"
                     /gene_synonym="dJ167O5.2"
                     /gene_synonym="NS5ATP2"
                     /codon_start=1
                     /product="HD domain containing 2"
                     /protein_id="AAH66332.1"
                     /db_xref="GeneID:51020"
                     /db_xref="HGNC:HGNC:21078"
                     /translation="MASVSSATFSGHGARSLLQFLRLVGQLKRVPRTGWVYRNVQRPE
                     SVSDHMYRMAVMAMVIKDDRLNKDRCVRLALVHDMAECIVGDIAPADNIPKEEKHRRE
                     EEAMKQITQLLPEDLRKELYELWEEYETRSSAEAKFVKQLDQCEMILQASEYEDLEHK
                     PGRLQDFYDSTAGKFNHPEIVQLVSELEAERSTNIAAAASEPHS"
BASE COUNT          279 a          199 c          219 g          211 t
ORIGIN      
        1 agcggggtcg gtggccacat ggcttcggtc tcctctgcga ccttctcggg ccacggggct
       61 cggtccctac tgcagttcct gcggctggta gggcagctca agagagtccc acgaactggc
      121 tgggtataca gaaatgtcca gaggccggag agcgtttcag atcacatgta ccggatggca
      181 gttatggcta tggtgatcaa agatgaccgt cttaacaaag accgatgtgt acgcctagcc
      241 ctggttcatg atatggcaga atgcatcgtt ggggacatag caccagcaga taacatcccc
      301 aaagaagaaa aacataggcg agaagaggaa gctatgaagc agataaccca gctcctacca
      361 gaggacctca gaaaggagct ctatgaactt tgggaagagt acgagacccg atctagtgca
      421 gaagccaaat ttgtgaagca gctagaccaa tgtgaaatga ttcttcaagc atctgaatat
      481 gaagaccttg aacacaaacc tgggagactg caagacttct atgattccac agcaggaaaa
      541 ttcaatcacc ctgagatagt ccagcttgtt tctgaacttg aggcagaaag aagcactaac
      601 atagctgcag ctgccagtga gccacactcc tgagacactc tctaaattgc tgcactcctg
      661 taacaaacat tatttttcca tttcattgta ttgtgttttg ccattgttgg tctgttgatt
      721 tccctagatg tgagtctgtt tgttttcaat tgtctgaact tcagcaagaa atgtgataca
      781 acttgggcac taaaagaagc cacagaacag gaagcggtca tgaaagtgcc atggatgaac
      841 actggaggtg gcagtgcctg tttatgaact aaataaataa atattaaaca ccaaaaaaaa
      901 aaaaaaaa
//