LOCUS BC065917 1590 bp mRNA linear HUM 24-FEB-2004 DEFINITION Homo sapiens solute carrier family 39 (zinc transporter), member 12, mRNA (cDNA clone IMAGE:5752160), partial cds. ACCESSION BC065917 VERSION BC065917.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1590) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1590) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (02-FEB-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 139 Row: m Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 22749432. FEATURES Location/Qualifiers source 1..1590 /db_xref="H-InvDB:HIT000262095" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5752160" /tissue_type="Brain, Lung, Testis, adult, pooled whole" /clone_lib="NIH_MGC_115" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..>1590 /gene="SLC39A12" /gene_synonym="FLJ30499" /db_xref="GeneID:221074" CDS 18..>1590 /gene="SLC39A12" /gene_synonym="FLJ30499" /codon_start=1 /product="SLC39A12 protein" /protein_id="AAH65917.1" /db_xref="GeneID:221074" /translation="MCFRTKLSVSWVPLFLLLSRVFSTETDKPSAQDSRGRGSSGQPA DLLQVLSAGDHPPHNHSRSLIKTLLEKTGCPRRRNGMQGDCNLCFEPDALLLIAGGNF EDQLREEVVQRVSLLLLYYIIHQEEICSSKLNMSNKEYKFYLHSLLSLRQDEDSSFLS QNETEDILAFTRQYFDTSQSQCMETKTLQKKSGIVSSEGANESTLPQLAAMIITLSLQ GVCLGQGNLPSPDYFTEYIFSSLNRTNTLRLSELDQLLNTLWTRSTCIKNEKIHQFQR KQNNIITHDQDYSNFSSSMEKESEDGPISWDQTCFSARQLVEIFLQKGLSLISKEDFK QMSPGIIQQLLSCSCHLPKDQQAKLPPTTLEKYGYSTVAVTLLTLGSMLGTALVLFHS CEENYRLILQLFVGLAVGTLSGDALLHLIPQVLGLHKQEAPEFGHFHESKGHIWKLMG LIGGIHGFFLIEKCFILLVSPNDKQGLSLVNGHVGHSHHLALNSELSDQAGRGKSAST IQLKSPEDSQAAEMPI" misc_feature 1107..1484 /gene="SLC39A12" /gene_synonym="FLJ30499" /note="Zip; Region: ZIP Zinc transporter. The ZIP family consists of zinc transport proteins and many putative metal transporters. The main contribution to this family is from the Arabidopsis thaliana ZIP protein family these proteins are responsible for zinc uptake in the plant. Also found within this family are C. elegans proteins of unknown function which are annotated as being similar to human growth arrest inducible gene product, although this protein in not found within this family" /db_xref="CDD:pfam02535" BASE COUNT 449 a 385 c 350 g 406 t ORIGIN 1 gtggaggaag cgtggaaatg tgcttccgga caaagctctc agtatcctgg gtgccattgt 61 ttcttctact cagccgtgtt ttttctactg agacagacaa accctcagcc caggacagca 121 gaggccgtgg gagttcaggc caaccggcag acctgctaca ggttctctct gctggtgacc 181 acccacccca caaccactca agaagcctca tcaaaacatt gttggagaaa actgggtgcc 241 cacggaggag aaacggaatg caaggagatt gcaatctgtg ctttgaacca gatgcactat 301 tactaatagc tggaggaaat tttgaagatc agcttagaga agaagtggtc cagagagttt 361 ctcttctcct tctctattac attattcatc aggaagagat ctgttcttca aagctcaaca 421 tgagtaataa agagtataaa ttttacctac acagcctact gagcctcagg caggatgaag 481 attcctcttt cctttcacag aatgagacag aagatatctt ggctttcacc aggcagtact 541 ttgacacttc tcaaagccag tgtatggaaa ccaaaacgct gcagaaaaaa tctggaatag 601 tgagcagtga aggtgctaat gaaagtacgc ttcctcagtt ggcagccatg atcattactt 661 tgtccctcca gggtgtttgt ctgggacaag gaaacttgcc ttccccagac tactttacag 721 aatatatttt cagttccttg aatcgtacga ataccctccg cctatcagaa ctagaccaac 781 tcctcaacac tctctggacc agaagtactt gtatcaaaaa tgagaaaatc catcaatttc 841 aaaggaaaca aaacaacata ataacccatg atcaggacta ttctaatttc tcttcatcca 901 tggaaaaaga gtctgaggat ggtccaattt cctgggatca gacctgcttc tctgctaggc 961 agctggtgga gatatttcta cagaagggcc tctcactcat ttctaaggag gactttaagc 1021 aaatgagtcc agggatcatc cagcagctcc tcagctgctc ctgccactta cccaaggacc 1081 aacaagcaaa gctgccacct accactctgg agaaatacgg ctacagcacg gtggctgtca 1141 cccttctcac actgggctcc atgctgggga cagcgctggt ccttttccat agctgtgagg 1201 agaactacag gcttatctta cagctgtttg tgggcttggc cgtcgggaca ctgtctgggg 1261 acgctctgct ccaccttatc cctcaggttc ttggtttaca taagcaggaa gccccagaat 1321 ttgggcattt ccatgaaagc aaaggtcata tttggaaact gatgggatta attggaggca 1381 tccatggatt tttcttgata gaaaaatgtt ttattcttct tgtatcacca aatgacaagc 1441 agggcctgtc attggttaat gggcacgtgg gtcattccca ccatcttgca ctcaactctg 1501 aattaagtga ccaggcaggc agaggcaaat ctgcttcaac tatccagttg aaaagcccag 1561 aagattcaca ggcagctgaa atgcctatag //