LOCUS BC065831 1500 bp mRNA linear HUM 17-JUL-2007 DEFINITION Homo sapiens SIX homeobox 6, mRNA (cDNA clone IMAGE:30366326), partial cds. ACCESSION BC065831 VERSION BC065831.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1500) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1500) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (26-JAN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Michael Brownstein cDNA Library Preparation: Invitrogen Corp cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 141 Row: l Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 6677978. FEATURES Location/Qualifiers source 1..1500 /db_xref="H-InvDB:HIT000262071" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:30366326" /tissue_type="Pituitary" /clone_lib="NIH_MGC_179" /lab_host="DH10B" /note="Vector: pCMV-SPORT6.1" gene <1..1500 /gene="SIX6" /gene_synonym="MCOPCT2" /gene_synonym="Six9" /db_xref="GeneID:4990" /db_xref="HGNC:HGNC:10892" /db_xref="MIM:606326" CDS <1..920 /gene="SIX6" /gene_synonym="MCOPCT2" /gene_synonym="Six9" /codon_start=3 /product="SIX6 protein" /protein_id="AAH65831.1" /db_xref="GeneID:4990" /db_xref="HGNC:HGNC:10892" /db_xref="MIM:606326" /translation="PPVGVVRSRPLSHRRHPVVCPAAPIRLINKRLAHSARPAGICCV SRSGLSALAAAGTASMFQLPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAA CEALNKNESVLRARAIVAFHGGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEK LRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKR ELAQATGLTPTQVGNWFKNRRQRDRAAAAKNRLQQQVLSQGSGRALRAEGDGTPEVLG VATSPAASLSSKAATSAISITSSDSECDI" BASE COUNT 353 a 456 c 412 g 279 t ORIGIN 1 ctcctccagt cggggtcgtc cgctcccggc cgttgagcca ccgccgccac ccggtagtgt 61 gtcccgctgc cccaatccgc ctcatcaaca agcgcctggc acactcagcc aggcccgcgg 121 gcatctgctg cgtgtcccgc tccgggctca gtgccctcgc cgccgccggc actgcctcga 181 tgttccagct gcccatcttg aatttcagcc cccagcaagt ggccggggta tgtgagaccc 241 tggaagagag cggcgatgtg gagcgcctgg gtcgcttcct ctggtcgctg cccgtggccc 301 ctgcggcctg cgaggccctc aacaagaatg agtcggtgct acgcgcacga gccatcgtgg 361 cctttcacgg tggcaactac cgcgagctct atcatatcct ggaaaaccac aagttcacca 421 aggagtcgca cgccaagctg caggcgctgt ggcttgaagc acactaccag gaggctgaga 481 agctgcgtgg aagacccctg ggacctgtgg acaagtaccg agtaaggaag aagttcccgc 541 tgccgcgcac catttgggac ggcgaacaga agacacactg cttcaaggag cgcacgcggc 601 acctgctacg cgagtggtac ctgcaggatc cataccctaa ccccagcaaa aaacgtgagc 661 tcgcccaggc aaccggactg acccctacgc aggtgggcaa ctggttcaaa aaccgccgac 721 aaagggaccg agcggctgca gccaagaaca gactccagca gcaggtcctg tcacagggtt 781 ccgggcgggc actacgggcg gagggcgacg gcacgccaga ggtgctgggc gtcgccacca 841 gcccggccgc cagtctatcc agcaaggcgg ccacttcagc catctccatc acgtccagcg 901 acagcgagtg cgacatctga gttgcccatc caggatgctc agaagcagat tccagtgtaa 961 aaacgagaaa aacaaaatga aagaggggaa gaagatgaga gacctgcaaa tccagcgcca 1021 cagaagccag gtgaccaggg acccgcgggc tcgggttgcc gtttcccgcc ccaccccgcg 1081 gccggcctgg cttcactggc gccctttggc cgcgaccacg ggaaccagcg gtgaggcctg 1141 acccagcacc acgttcttct tgctttgctt tttcctaagg attttgctgc aaagtctcct 1201 tcggaacccg aactgcaagc tgagcgcctg cccagattct cccatgggta tttcacgtcg 1261 aaaggacgct gttacatatg tataactttc gctttaaagt ttttttttaa caaaacatat 1321 atatgctgtt tatttactta tttaagagac cgccatggta ggtttctctg tagcttgggg 1381 aacttgctgt ttctaaacat gcaggctggt ggtgatgggt tctgtgtgga gaagccaaac 1441 aataaaacaa cctagtgggc aaccttctta attaaaaaaa aaaaaaaaaa aaaaaaaaaa //