LOCUS       BC064998                1487 bp    mRNA    linear   HUM 13-JAN-2004
DEFINITION  Homo sapiens calpain, small subunit 1, mRNA (cDNA clone MGC:75186
            IMAGE:5785274), complete cds.
ACCESSION   BC064998
VERSION     BC064998.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1487)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1487)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JAN-2004) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 139 Row: p Column: 8
            This clone was selected for full length sequencing because it
            passed the following selection criteria: Hexamer frequency ORF
            analysis, Similarity but not identity to protein.
FEATURES             Location/Qualifiers
     source          1..1487
                     /db_xref="H-InvDB:HIT000261703"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:75186 IMAGE:5785274"
                     /tissue_type="Uterus, leiomyosarcoma"
                     /clone_lib="NIH_MGC_71"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..1487
                     /gene="CAPNS1"
                     /gene_synonym="30K"
                     /gene_synonym="CANP"
                     /gene_synonym="CANPS"
                     /gene_synonym="CAPN4"
                     /gene_synonym="CDPS"
                     /db_xref="GeneID:826"
                     /db_xref="MIM:114170"
     CDS             153..959
                     /gene="CAPNS1"
                     /gene_synonym="30K"
                     /gene_synonym="CANP"
                     /gene_synonym="CANPS"
                     /gene_synonym="CAPN4"
                     /gene_synonym="CDPS"
                     /codon_start=1
                     /product="CAPNS1 protein"
                     /protein_id="AAH64998.1"
                     /db_xref="GeneID:826"
                     /db_xref="MIM:114170"
                     /translation="MFLVDSFLKGGGGGGGGGGGLGGGLGGVLGGLIGGAGGGGGGGG
                     GGGGGGGGGGGGTAMRILGGVISAISEAAAQYNPEPPPPRTHYSNIEANESEEVRQFR
                     RLFAQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLG
                     FEEFKYLWNNIKRWQAIYKQFDTDRSGTICSSELPGAFEAAGFHLNEHLYNMIIRRYS
                     DESGNMDFDNFISCLVRLDAMFRAFKSLDKDGTGQIQVNIQEWLQLTMYS"
     misc_feature    582..734
                     /gene="CAPNS1"
                     /gene_synonym="30K"
                     /gene_synonym="CANP"
                     /gene_synonym="CANPS"
                     /gene_synonym="CAPN4"
                     /gene_synonym="CDPS"
                     /note="EFh; Region: EF-hand, calcium binding motif"
                     /db_xref="CDD:cd00051"
BASE COUNT          305 a          466 c          425 g          291 t
ORIGIN      
        1 gccgactccc agaactccgg acgtgtgcgg cggtgggcgc ccggcccgtg ccccctccgc
       61 accccgcaac tccgactttg gcggccccca gacccggcga aaccgtgaag tctcggcctc
      121 aggagccccc cagatccatg tgagtcgcag ccatgttcct ggttgactcg ttcttgaagg
      181 gcggcggcgg cggcggcggg ggaggcgggg gcctgggtgg gggcctggga ggtgtgcttg
      241 gaggcctgat cggcggggcc gggggcggcg gcggcggcgg cggcggcggc ggcggtggtg
      301 gaggcggcgg tggcggtgga acggccatgc gcatcctagg cggagtcatc agcgccatca
      361 gcgaggcggc tgcgcagtac aacccggagc ccccgccccc acgcacacat tactccaaca
      421 ttgaggccaa cgagagtgag gaggtccggc agttccggag actctttgcc cagctggctg
      481 gagatgacat ggaggtcagc gccacagaac tcatgaacat tctcaataag gttgtgacac
      541 gacaccctga tctgaagact gatggttttg gcattgacac atgtcgcagc atggtggccg
      601 tgatggatag cgacaccaca ggcaagctgg gctttgagga attcaagtac ttgtggaaca
      661 acatcaaaag gtggcaggcc atatacaaac agttcgacac tgaccgatca gggaccattt
      721 gcagtagtga actcccaggt gcctttgagg cagcagggtt ccacctgaat gagcatctct
      781 ataacatgat catccgacgc tactcagatg aaagtgggaa catggatttt gacaacttca
      841 tcagctgctt ggtcaggctg gacgccatgt tccgtgcctt caaatctctt gacaaagatg
      901 gcactggaca aatccaggtg aacatccagg agtggctgca gctgactatg tattcctgaa
      961 ctggagcccc agacccgccc cctcaccgcc ttgctatagg agtcacctgg agcctcggtc
     1021 tctcccaggg ccgatcctgt ctgcagtcac atctttgtgg ggcctgctga cccacaagct
     1081 tttgttctct cagtacttgt tacccagctt ctcaacatcc agggcccaat ttgccctgcc
     1141 tggagttccc cctggctcta ggacactcta acaagctctg tccacgggtc tccccattcc
     1201 caccaggccc tgcacacacc cactccgtaa cctctcccct gtacctgtgc caagcctagc
     1261 acttgtgatg cctccatgcc ccgagggccc tctctcagtt ctgggaggat gactccagtc
     1321 cctgcacgcc ctggcacacc cttcacggtt gctacccagg cggccaagct ccagaccgtg
     1381 ccagacccag gtgccccagt gcctttgtct atattctgct cccagcctgc caggcccagg
     1441 aggaaataaa catgccccag ttgctgatct ctaaaaaaaa aaaaaaa
//