LOCUS       BC064840                4084 bp    mRNA    linear   HUM 09-JUN-2008
DEFINITION  Homo sapiens histone deacetylase 7, mRNA (cDNA clone MGC:74915
            IMAGE:6179239), complete cds.
ACCESSION   BC064840
VERSION     BC064840.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 4084)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 4084)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JAN-2004) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Dr. James R. Lupski
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 141 Row: b Column: 13
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 13259523.
FEATURES             Location/Qualifiers
     source          1..4084
                     /db_xref="H-InvDB:HIT000261597"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:74915 IMAGE:6179239"
                     /tissue_type="Peripheral Nervous System, dorsal root
                     ganglion"
                     /clone_lib="Lupski_dorsal_root_ganglion"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..4084
                     /gene="HDAC7"
                     /gene_synonym="DKFZP586J0917"
                     /gene_synonym="HD7A"
                     /db_xref="GeneID:51564"
                     /db_xref="HGNC:HGNC:14067"
                     /db_xref="MIM:606542"
     CDS             90..2954
                     /gene="HDAC7"
                     /gene_synonym="DKFZP586J0917"
                     /gene_synonym="HD7A"
                     /codon_start=1
                     /product="HDAC7 protein"
                     /protein_id="AAH64840.1"
                     /db_xref="GeneID:51564"
                     /db_xref="HGNC:HGNC:14067"
                     /db_xref="MIM:606542"
                     /translation="MHSPGADGTQVSPGAHYCSPTGAGCPRPCADTPGPQPQPMDLRV
                     GQRPPVEPPPEPTLLALQRPQRLHHHLFLAGLQQQRSVEPMRLSMDTPMPELQVGPQE
                     QELRQLLHKDKSKRSAVASSVVKQKLAEVILKKQQAALERTVHPNSPGIPYRTLEPLE
                     TEGATRSMLSSFLPPVPSLPSDPPEHFPLRKTVSEPNLKLRYKPKKSLERRKNPLLRK
                     ESAPPSLRRRPAETLGDSSPSSSSTPASGCSSPNDSEHGPNPILGSEADSDRRTHPTL
                     GPRGPILGSPHTPLFLPHGLEPEAGGTLPSRLQPILLLDPSGSHAPLLTVPGLGPLPF
                     HFAQSLMTTERLSGSGLHWPLSRTRSEPLPPSATAPPPPGPMQPRLEQLKTHVQVIKR
                     SAKPSEKPRLRQIPSAEDLETDGGGPGQVVDDGLEHRELGHGQPEARGPAPLQQHPQV
                     LLWEQQRLAGRLPRGSTGDTVLLPLAQGGHRPLSRAQSSPAAPASLSAPEPASQARVL
                     SSSETPARTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQC
                     ECLRGRKASLEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVG
                     VDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFC
                     FFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFF
                     PGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLV
                     SAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEA
                     CVAALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVHSKYWGCMQRLASCPDSWVPRV
                     PGADKEEVEAVTALASLSVGILAEDRPSEQLVEEEEPMNL"
BASE COUNT          798 a         1341 c         1206 g          739 t
ORIGIN      
        1 cagcctccgg cgactggggg gatgtgaggc cggcgcccca gccccccgcc ccgccatgag
       61 ccccccgctc tgagggcccc ggcccctgga tgcacagccc cggcgctgat gggacccagg
      121 tgagcccggg tgcccactac tgcagcccca ctggcgcagg ctgccccagg ccctgtgcag
      181 acacaccagg ccctcagccg cagcccatgg acctgcgggt gggccagcgg cccccagtgg
      241 agcccccacc agagcccaca ttgctggccc tgcagcgtcc ccagcgcctg caccaccacc
      301 tcttcctagc aggcctgcag cagcagcgct cggtggagcc catgaggctc tccatggaca
      361 cgccgatgcc cgagttgcag gtgggacccc aggaacaaga gctgcggcag cttctccaca
      421 aggacaagag caagcgaagt gctgtagcca gcagcgtggt caagcagaag ctagcggagg
      481 tgattctgaa aaaacagcag gcggccctag aaagaacagt ccatcccaac agccccggca
      541 ttccctacag aaccctggag cccctggaga cggaaggagc cacccgctcc atgctcagca
      601 gctttttgcc tcctgttccc agcctgccca gtgacccccc agagcacttc cctctgcgca
      661 agacagtctc tgagcccaac ctgaagctgc gctataagcc caagaagtcc ctggagcgga
      721 ggaagaatcc actgctccga aaggagagtg cgccccccag cctccggcgg cggcccgcag
      781 agaccctcgg agactcctcc ccaagtagta gcagcacgcc cgcatcaggg tgcagctccc
      841 ccaatgacag cgagcacggc cccaatccca tcctgggctc ggaggctgac agtgaccgca
      901 ggacccatcc gactctgggc cctcgggggc caatcctggg gagcccccac actcccctct
      961 tcctgcccca tggcttggag cccgaggctg ggggcacctt gccctctcgc ctgcagccca
     1021 ttctcctcct ggacccctca ggctctcatg ccccgctgct gactgtgccc gggcttgggc
     1081 ccttgccctt ccactttgcc cagtccttaa tgaccaccga gcggctctct gggtcaggcc
     1141 tccactggcc actgagccgg actcgctcag agcccctgcc ccccagtgcc accgctcccc
     1201 caccgccggg ccccatgcag ccccgcctgg agcagctcaa aactcacgtc caggtgatca
     1261 agaggtcagc caagccgagt gagaagcccc ggctgcggca gataccctcg gctgaagacc
     1321 tggagacaga tggcggggga ccgggccagg tggtggacga tggcctggag cacagggagc
     1381 tgggccatgg gcagcctgag gccagaggcc ccgctcctct ccagcagcac cctcaggtgt
     1441 tgctctggga acagcagcga ctggctgggc ggctcccccg gggcagcacc ggggacactg
     1501 tgctgcttcc tctggcccag ggtgggcacc ggcctctgtc ccgggctcag tcttccccag
     1561 ccgcacctgc ctcactgtca gccccagagc ctgccagcca ggcccgagtc ctctccagct
     1621 cagagacccc tgccaggacc ctgcccttca ccacagggct gatctatgac tcggtcatgc
     1681 tgaagcacca gtgctcctgc ggtgacaaca gcaggcaccc ggagcacgcc ggccgcatcc
     1741 agagcatctg gtcccggctg caggagcggg ggctccggag ccagtgtgag tgtctccgag
     1801 gccggaaggc ctccctggaa gagctgcagt cggtccactc tgagcggcac gtgctcctct
     1861 acggcaccaa cccgctcagc cgcctcaaac tggacaacgg gaagctggca gggctcctgg
     1921 cacagcggat gtttgtgatg ctgccctgtg gtggggttgg ggtggacact gacaccatct
     1981 ggaatgagct tcattcctcc aatgcagccc gctgggccgc tggcagtgtc actgacctcg
     2041 ccttcaaagt ggcttctcgt gagctaaaga atggtttcgc tgtggtgcgg cccccaggac
     2101 accatgcaga tcattcaaca gccatgggct tctgcttctt caactcagtg gccatcgcct
     2161 gccggcagct gcaacagcag agcaaggcca gcaagatcct cattgtagac tgggacgtgc
     2221 accatggcaa cggcacccag caaaccttct accaagaccc cagtgtgctc tacatctccc
     2281 tgcatcgcca tgacgacggc aacttcttcc cggggagtgg ggctgtggat gaggtagggg
     2341 ctggcagcgg tgagggcttc aatgtcaatg tggcctgggc tggaggtctg gaccccccca
     2401 tgggggatcc tgagtacctg gctgctttca ggatagtcgt gatgcccatc gcccgagagt
     2461 tctctccaga cctagtcctg gtgtctgctg gatttgatgc tgctgagggt cacccggccc
     2521 cactgggtgg ctaccatgtt tctgccaaat gttttggata catgacgcag caactgatga
     2581 acctggcagg aggcgcagtg gtgctggcct tggagggtgg ccatgacctc acagccatct
     2641 gtgacgcctc tgaggcctgt gtggctgctc ttctgggtaa cagggtggat cccctttcag
     2701 aagaaggctg gaaacagaaa cccaacctca atgccatccg ctctctggag gccgtgatcc
     2761 gggtgcacag taaatactgg ggctgcatgc agcgcctggc ctcctgtcca gactcctggg
     2821 tgcctagagt gccaggggct gacaaagaag aagtggaggc agtgaccgca ctggcgtccc
     2881 tctctgtggg catcctggct gaagataggc cctcggagca gctggtggag gaggaagaac
     2941 ctatgaatct ctaaggctct ggaaccatct gcccgcccac catgcccttg ggacctggtt
     3001 ctcttctaac ccctggcaat agcccccatt cctgggtctt tagagatcct gtgggcaagt
     3061 agttggaacc agagaacagc ctgcctgctt tgacagttat cccagggagc gtgagaaaat
     3121 ccctgggtct agaatgggaa ctggagagga ccctgagagg agacgggctg ggcggcgacc
     3181 cccacagggc tctcgagaac agattctccc ctccagtatg ggccctggct gtggccccca
     3241 ttcctcagga ctgcacagag gaggactggc tccggctccg tcgggctcac ccttaaccac
     3301 tattcctggc tctgcaaacc ccagactttg cacacagccc caggctccac acagaaatgt
     3361 gaacttggcc tcagacaggc tggcccttcc taggctctag gggctagggg ggagtgggga
     3421 gccaagaggt cccatattcc tgagtgcagg ggtagtccct ctcacctgct tcctcagacg
     3481 actctggaag cttccctcta ccaccgggca ctgagacgaa gctccctgac agccgagact
     3541 ggcagccctc catctggtcc gtaccctcgc cagaggcccc cctacatcaa cctcctggcg
     3601 atgccctggt ggagcagatg ggtgctctgg gagtcctgtg cttcctgatc caatggtgcc
     3661 aaacccttca tctcccccag aagcgcagca tacccctggg acccctcggc cactgcccac
     3721 tcggggagcc ttctctgttt ctggggcctc ccccaccata gctctgattc ccaccccaca
     3781 taggaatagc ctgactgagg gggaaggggt gggagagaag atacagacat ggaggagggg
     3841 aggctgctct ggcaaagtct tcaaggcttt tgggggtcca ggcctggggt caagaaggaa
     3901 aatgtgtgtg agcatgtgtg tgagtgaggc gtgtgtgtga gcgtgtgtgt gagtgaggcg
     3961 tgtgtgtgtg tctttcctag gacccaccat accctgtgta tgtatgcatg tttttgtaaa
     4021 aaggaagaaa atggaaaaaa atctgaacaa taaatgtttt atttgcttta aaaaaaaaaa
     4081 aaaa
//