LOCUS BC064840 4084 bp mRNA linear HUM 09-JUN-2008 DEFINITION Homo sapiens histone deacetylase 7, mRNA (cDNA clone MGC:74915 IMAGE:6179239), complete cds. ACCESSION BC064840 VERSION BC064840.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4084) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4084) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JAN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. James R. Lupski cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 141 Row: b Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 13259523. FEATURES Location/Qualifiers source 1..4084 /db_xref="H-InvDB:HIT000261597" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:74915 IMAGE:6179239" /tissue_type="Peripheral Nervous System, dorsal root ganglion" /clone_lib="Lupski_dorsal_root_ganglion" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..4084 /gene="HDAC7" /gene_synonym="DKFZP586J0917" /gene_synonym="HD7A" /db_xref="GeneID:51564" /db_xref="HGNC:HGNC:14067" /db_xref="MIM:606542" CDS 90..2954 /gene="HDAC7" /gene_synonym="DKFZP586J0917" /gene_synonym="HD7A" /codon_start=1 /product="HDAC7 protein" /protein_id="AAH64840.1" /db_xref="GeneID:51564" /db_xref="HGNC:HGNC:14067" /db_xref="MIM:606542" /translation="MHSPGADGTQVSPGAHYCSPTGAGCPRPCADTPGPQPQPMDLRV GQRPPVEPPPEPTLLALQRPQRLHHHLFLAGLQQQRSVEPMRLSMDTPMPELQVGPQE QELRQLLHKDKSKRSAVASSVVKQKLAEVILKKQQAALERTVHPNSPGIPYRTLEPLE TEGATRSMLSSFLPPVPSLPSDPPEHFPLRKTVSEPNLKLRYKPKKSLERRKNPLLRK ESAPPSLRRRPAETLGDSSPSSSSTPASGCSSPNDSEHGPNPILGSEADSDRRTHPTL GPRGPILGSPHTPLFLPHGLEPEAGGTLPSRLQPILLLDPSGSHAPLLTVPGLGPLPF HFAQSLMTTERLSGSGLHWPLSRTRSEPLPPSATAPPPPGPMQPRLEQLKTHVQVIKR SAKPSEKPRLRQIPSAEDLETDGGGPGQVVDDGLEHRELGHGQPEARGPAPLQQHPQV LLWEQQRLAGRLPRGSTGDTVLLPLAQGGHRPLSRAQSSPAAPASLSAPEPASQARVL SSSETPARTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQC ECLRGRKASLEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVG VDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFC FFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFF PGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLV SAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEA CVAALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVHSKYWGCMQRLASCPDSWVPRV PGADKEEVEAVTALASLSVGILAEDRPSEQLVEEEEPMNL" BASE COUNT 798 a 1341 c 1206 g 739 t ORIGIN 1 cagcctccgg cgactggggg gatgtgaggc cggcgcccca gccccccgcc ccgccatgag 61 ccccccgctc tgagggcccc ggcccctgga tgcacagccc cggcgctgat gggacccagg 121 tgagcccggg tgcccactac tgcagcccca ctggcgcagg ctgccccagg ccctgtgcag 181 acacaccagg ccctcagccg cagcccatgg acctgcgggt gggccagcgg cccccagtgg 241 agcccccacc agagcccaca ttgctggccc tgcagcgtcc ccagcgcctg caccaccacc 301 tcttcctagc aggcctgcag cagcagcgct cggtggagcc catgaggctc tccatggaca 361 cgccgatgcc cgagttgcag gtgggacccc aggaacaaga gctgcggcag cttctccaca 421 aggacaagag caagcgaagt gctgtagcca gcagcgtggt caagcagaag ctagcggagg 481 tgattctgaa aaaacagcag gcggccctag aaagaacagt ccatcccaac agccccggca 541 ttccctacag aaccctggag cccctggaga cggaaggagc cacccgctcc atgctcagca 601 gctttttgcc tcctgttccc agcctgccca gtgacccccc agagcacttc cctctgcgca 661 agacagtctc tgagcccaac ctgaagctgc gctataagcc caagaagtcc ctggagcgga 721 ggaagaatcc actgctccga aaggagagtg cgccccccag cctccggcgg cggcccgcag 781 agaccctcgg agactcctcc ccaagtagta gcagcacgcc cgcatcaggg tgcagctccc 841 ccaatgacag cgagcacggc cccaatccca tcctgggctc ggaggctgac agtgaccgca 901 ggacccatcc gactctgggc cctcgggggc caatcctggg gagcccccac actcccctct 961 tcctgcccca tggcttggag cccgaggctg ggggcacctt gccctctcgc ctgcagccca 1021 ttctcctcct ggacccctca ggctctcatg ccccgctgct gactgtgccc gggcttgggc 1081 ccttgccctt ccactttgcc cagtccttaa tgaccaccga gcggctctct gggtcaggcc 1141 tccactggcc actgagccgg actcgctcag agcccctgcc ccccagtgcc accgctcccc 1201 caccgccggg ccccatgcag ccccgcctgg agcagctcaa aactcacgtc caggtgatca 1261 agaggtcagc caagccgagt gagaagcccc ggctgcggca gataccctcg gctgaagacc 1321 tggagacaga tggcggggga ccgggccagg tggtggacga tggcctggag cacagggagc 1381 tgggccatgg gcagcctgag gccagaggcc ccgctcctct ccagcagcac cctcaggtgt 1441 tgctctggga acagcagcga ctggctgggc ggctcccccg gggcagcacc ggggacactg 1501 tgctgcttcc tctggcccag ggtgggcacc ggcctctgtc ccgggctcag tcttccccag 1561 ccgcacctgc ctcactgtca gccccagagc ctgccagcca ggcccgagtc ctctccagct 1621 cagagacccc tgccaggacc ctgcccttca ccacagggct gatctatgac tcggtcatgc 1681 tgaagcacca gtgctcctgc ggtgacaaca gcaggcaccc ggagcacgcc ggccgcatcc 1741 agagcatctg gtcccggctg caggagcggg ggctccggag ccagtgtgag tgtctccgag 1801 gccggaaggc ctccctggaa gagctgcagt cggtccactc tgagcggcac gtgctcctct 1861 acggcaccaa cccgctcagc cgcctcaaac tggacaacgg gaagctggca gggctcctgg 1921 cacagcggat gtttgtgatg ctgccctgtg gtggggttgg ggtggacact gacaccatct 1981 ggaatgagct tcattcctcc aatgcagccc gctgggccgc tggcagtgtc actgacctcg 2041 ccttcaaagt ggcttctcgt gagctaaaga atggtttcgc tgtggtgcgg cccccaggac 2101 accatgcaga tcattcaaca gccatgggct tctgcttctt caactcagtg gccatcgcct 2161 gccggcagct gcaacagcag agcaaggcca gcaagatcct cattgtagac tgggacgtgc 2221 accatggcaa cggcacccag caaaccttct accaagaccc cagtgtgctc tacatctccc 2281 tgcatcgcca tgacgacggc aacttcttcc cggggagtgg ggctgtggat gaggtagggg 2341 ctggcagcgg tgagggcttc aatgtcaatg tggcctgggc tggaggtctg gaccccccca 2401 tgggggatcc tgagtacctg gctgctttca ggatagtcgt gatgcccatc gcccgagagt 2461 tctctccaga cctagtcctg gtgtctgctg gatttgatgc tgctgagggt cacccggccc 2521 cactgggtgg ctaccatgtt tctgccaaat gttttggata catgacgcag caactgatga 2581 acctggcagg aggcgcagtg gtgctggcct tggagggtgg ccatgacctc acagccatct 2641 gtgacgcctc tgaggcctgt gtggctgctc ttctgggtaa cagggtggat cccctttcag 2701 aagaaggctg gaaacagaaa cccaacctca atgccatccg ctctctggag gccgtgatcc 2761 gggtgcacag taaatactgg ggctgcatgc agcgcctggc ctcctgtcca gactcctggg 2821 tgcctagagt gccaggggct gacaaagaag aagtggaggc agtgaccgca ctggcgtccc 2881 tctctgtggg catcctggct gaagataggc cctcggagca gctggtggag gaggaagaac 2941 ctatgaatct ctaaggctct ggaaccatct gcccgcccac catgcccttg ggacctggtt 3001 ctcttctaac ccctggcaat agcccccatt cctgggtctt tagagatcct gtgggcaagt 3061 agttggaacc agagaacagc ctgcctgctt tgacagttat cccagggagc gtgagaaaat 3121 ccctgggtct agaatgggaa ctggagagga ccctgagagg agacgggctg ggcggcgacc 3181 cccacagggc tctcgagaac agattctccc ctccagtatg ggccctggct gtggccccca 3241 ttcctcagga ctgcacagag gaggactggc tccggctccg tcgggctcac ccttaaccac 3301 tattcctggc tctgcaaacc ccagactttg cacacagccc caggctccac acagaaatgt 3361 gaacttggcc tcagacaggc tggcccttcc taggctctag gggctagggg ggagtgggga 3421 gccaagaggt cccatattcc tgagtgcagg ggtagtccct ctcacctgct tcctcagacg 3481 actctggaag cttccctcta ccaccgggca ctgagacgaa gctccctgac agccgagact 3541 ggcagccctc catctggtcc gtaccctcgc cagaggcccc cctacatcaa cctcctggcg 3601 atgccctggt ggagcagatg ggtgctctgg gagtcctgtg cttcctgatc caatggtgcc 3661 aaacccttca tctcccccag aagcgcagca tacccctggg acccctcggc cactgcccac 3721 tcggggagcc ttctctgttt ctggggcctc ccccaccata gctctgattc ccaccccaca 3781 taggaatagc ctgactgagg gggaaggggt gggagagaag atacagacat ggaggagggg 3841 aggctgctct ggcaaagtct tcaaggcttt tgggggtcca ggcctggggt caagaaggaa 3901 aatgtgtgtg agcatgtgtg tgagtgaggc gtgtgtgtga gcgtgtgtgt gagtgaggcg 3961 tgtgtgtgtg tctttcctag gacccaccat accctgtgta tgtatgcatg tttttgtaaa 4021 aaggaagaaa atggaaaaaa atctgaacaa taaatgtttt atttgcttta aaaaaaaaaa 4081 aaaa //