LOCUS BC063855 4356 bp mRNA linear HUM 23-DEC-2003 DEFINITION Homo sapiens activating transcription factor 7 interacting protein, mRNA (cDNA clone MGC:75187 IMAGE:6181437), complete cds. ACCESSION BC063855 VERSION BC063855.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4356) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4356) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. James R. Lupski cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield, Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin, Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott, Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy, George Yang, Scott Zuyderduyn, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 141 Row: c Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis, Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..4356 /db_xref="H-InvDB:HIT000261231" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:75187 IMAGE:6181437" /tissue_type="Peripheral Nervous System, dorsal root ganglion" /clone_lib="Lupski_dorsal_root_ganglion" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..4356 /gene="ATF7IP" /gene_synonym="FLJ10139" /gene_synonym="FLJ10688" /gene_synonym="MCAF" /gene_synonym="p621" /db_xref="GeneID:55729" CDS 143..3460 /gene="ATF7IP" /gene_synonym="FLJ10139" /gene_synonym="FLJ10688" /gene_synonym="MCAF" /gene_synonym="p621" /codon_start=1 /product="ATF7IP protein" /protein_id="AAH63855.1" /db_xref="GeneID:55729" /translation="MDSLEEPQKKVFKARKTMRVSDRQQLEAVYKVKEELLKTDVKLL NGNHENGDLDPTSPLENMDYIKDKEEVNGIEEICFDPEGSKAEWKETPCILSVNVKNK QDDDLNCEPLSPHNITPEPVSKLPAEPVSGDPAPGDLDAGDPASGVLASGDSTSGDPT SSEPSSSDAASGDATSGDAPSGDVSPGDATSGDATADDLSSGDPTSSDPIPGEPVPVE PISGDCAADDIASSEITSVDLASGAPASTDPASDDLASGDLSSSELASDDLATGELAS DELTSESTFDRTFEPKSVPVCEPVPEIDNIEPSSNKDDDFLEKNGADEKLEQIQSKDS LDEKNKADNNIDANEETLETDDTTICSDRPPENEKKVEEDIITELALGEDAISSSMEI DQGEKNEDETSADLVETINENVIEDNKSENILENTDSMETDEIIPILEKLAPSEDELT CFSKTSLLPIDETNPDLEEKMESSFGSPSKQESSESLPKEAFLVLSDEEDISGEKDES EVISQNETCSPEVESNEKDNRPEEEEQVIHEDDERPSEKNEFSRRKRSKSEDMDNVQS KRRRYMEEEYEAEFQVKITAKGDINQKLQKVIQWLLEEKLCALQCAVFDKTLAELKTR VEKIECNKRHKTVLTELQAKIARLTKRFEAAKEDLKKRHEHPPNPPVSPGKTVNDVNS NNNMSYRNAGTVRQMLESKRNVSESAPPSFQTPVNTVSSTNLVTPPAVVSSQPKLQTP VTSGSLTATSVLPAPNTATVVATTQVPSGNPQPTISLQPLPVILHVPVAVSSQPQLLQ SHPGTLVTNQPSGNVEFISVQSPPTVSGLTKNPVSLPSLPNPTKPNNVPSVPSPSIQR NPTASAAPLGTTLAVQAVPTAHSIVQATRTSLPTVGPSGLYSPSTNRGPIQMKIPISA FSTSSAAEQNSNTTPRIENQTNKTIDASVSKKAADSTSQCGKATGSDSSGVIDLTMDD EESGASQDPKKLNHTPVSTMSSSQPVSRPLQPIQPAPPLQPSGVPTSGPSQTTIHLLP TAPTTVNVTHRPVTQVTTRLPVPRAPANHQVVYTTLPAPPAQAPLRGTVMQAPAVRQV NPQNSKRFFLYMAPRYM" BASE COUNT 1446 a 892 c 876 g 1142 t ORIGIN 1 ggcggcggcg gtggcagcgg cggcgcggcg actgaagcgc gcgaaaagct gaggcggcaa 61 cgtcggggac ggctgcgcgg gacggctctg taggaaggaa cttggttccc cctccctcag 121 cttccgcccc aaaagattca gaatggacag tttagaagaa cctcagaaaa aagtctttaa 181 ggctcgaaaa acgatgagag tgagtgatcg tcagcaactt gaagcagtgt acaaggtcaa 241 agaagaactg ttgaaaactg atgtcaagct gttaaatggc aaccatgaaa atggagattt 301 ggacccaacc tcacctttgg aaaacatgga ttacattaaa gacaaggaag aggtgaatgg 361 cattgaagag atttgttttg atcctgaagg aagtaaagca gaatggaagg aaacaccctg 421 tatcctaagt gttaatgtaa aaaacaagca ggatgatgat ttaaattgtg aacctttgtc 481 tccccataat ataactccag aaccagtctc taaactgcct gctgaaccag tttctggtga 541 tccagcccct ggtgatctgg atgccggaga tccagcctcc ggagtactgg cctctggtga 601 ttccacctct ggtgatccca cctctagcga gccctcctct agtgatgctg cctctggtga 661 tgcaacctct ggtgatgccc cttctggtga tgtgtcccct ggtgatgcca cctctggtga 721 tgccactgct gatgatctct cctctggtga tcccacctct agtgatccca tcccaggtga 781 accggtccct gttgaaccca tttctggtga ttgtgccgct gatgatatag cctctagtga 841 aataacttct gttgatctgg cttctggagc accagcttcc actgatccag cctctgatga 901 tctggcctct ggtgatctat cctctagtga actggcctct gatgatctgg ccactggtga 961 actggcctct gatgagctga cttctgaatc aacctttgat cgtacctttg aaccaaagtc 1021 tgtaccagtt tgtgaaccag ttcctgaaat tgacaatata gaaccaagta gcaataaaga 1081 tgatgatttt cttgaaaaaa atggagctga tgaaaaatta gagcaaattc agagtaaaga 1141 ctcattggat gagaaaaata aagctgataa taatattgat gctaatgaag aaactctaga 1201 aacagatgat acaactattt gttcagatcg acctcctgaa aatgaaaaga aggtagagga 1261 agatattatc acagagcttg ctcttggaga agatgctata tctagcagta tggaaattga 1321 ccaaggtgaa aagaatgaag atgaaacttc tgcagatctt gtagaaacga ttaatgaaaa 1381 tgttattgaa gataacaaaa gtgagaatat cttagaaaat acagactcta tggagacaga 1441 tgaaatcatt cctattttgg aaaagcttgc accttctgag gatgaactta cttgcttttc 1501 taaaacatct ctccttccaa tcgatgagac aaatccagat ttggaagaga aaatggaaag 1561 ttcttttggt tcaccatcta aacaagaaag tagtgagagt ttgccaaaag aagcctttct 1621 ggtcctctct gatgaagagg atatttcggg tgaaaaagat gagtctgaag ttatatcgca 1681 aaatgaaacg tgctctccag aagtagaaag taatgaaaag gacaacagac ctgaggaaga 1741 agagcaagta atacatgaag atgatgaaag accttctgag aaaaatgaat tttctagacg 1801 aaaacgttct aaatcagaag acatggacaa tgtacagtct aaacgtcgtc gatatatgga 1861 agaagaatat gaggcagaat ttcaagtaaa gattacagcc aaaggagaca ttaaccagaa 1921 acttcaaaag gttatacagt ggttgctgga agaaaaattg tgtgcgctgc agtgtgctgt 1981 atttgataag actttggcag aattgaaaac acgagtggaa aagattgaat gtaacaagag 2041 gcataaaaca gttctcactg aactacaggc caagatagcc aggttaacca aacgctttga 2101 agcagccaaa gaagatctta agaaaagaca tgaacatcca cccaacccac cagtatcacc 2161 aggaaaaact gtaaatgatg tcaacagcaa taataacatg tcttacagaa atgcaggcac 2221 agtgagacag atgctggagt ccaaaagaaa tgtaagcgag agtgcaccac catcctttca 2281 aactcctgtg aatacagtat cttcaaccaa tcttgtcact cctccagcag ttgtcagtag 2341 tcaacctaaa ttgcagactc cagtgacttc gggttccctc acagcaacgt cagttcttcc 2401 tgcacccaat acagctactg tagttgctac tactcaggtg cctagtggaa atccccagcc 2461 tacaatctct ttacagcctt tgccagtgat tttgcatgta cctgttgcag tatcctccca 2521 gcctcagctt ctacagagcc atccagggac tttggtgact aatcaaccat ctggcaatgt 2581 tgaattcatt tctgtgcaaa gcccacctac agtgagtggt cttaccaaaa atccagtatc 2641 cttgccatcc ttgccaaatc ccactaaacc aaacaacgtt ccttctgtgc ccagtcctag 2701 tattcaaagg aaccctactg ccagtgctgc accattggga acaacacttg ctgtgcaggc 2761 tgttccaaca gcacactcta ttgtacaagc cacaaggact tctttaccca cagtgggccc 2821 atcaggactc tatagtccat caactaatcg aggtcctata cagatgaaaa ttccaatttc 2881 tgcatttagt acttcgtctg ctgcagaaca gaacagcaat accaccccaa gaattgaaaa 2941 ccagacaaac aaaacaatag atgcttctgt cagtaagaaa gcagctgata gcacatcaca 3001 gtgtggaaaa gccactggca gtgattcaag tggtgtcatt gatctcacaa tggatgatga 3061 agagagtgga gcttcacaag accccaaaaa actaaatcac actcctgtat caaccatgag 3121 ttcttctcag cctgtgtcac gaccattgca acccatacaa ccagcaccgc ctcttcaacc 3181 atctggggtg ccaacaagtg gaccatctca gaccaccata cacttactac ctacagctcc 3241 aactaccgtg aatgtaacac atcgtccagt aactcaggtg accacaagac tccctgtacc 3301 aagagctcct gcaaaccacc aggtggttta tacaactctt cctgcaccac cagctcaggc 3361 tcccttgcga ggaactgtta tgcaggctcc tgctgttcgg caggtcaatc cccaaaatag 3421 taagagattt ttcttgtata tggccccaag atacatgtag ttctcttcag catttagttg 3481 gaatggcata taataatgtt aaattttgca aaaatttctt ataatgtcat attaaaagta 3541 ttgttataag ttcaagagat ctgtactaca acatagaaac tatagtatag ttaaaatcaa 3601 tgtagtatat tcttgaaaat agctgataga gcagatttta agtattgtca ccacacacaa 3661 aaaaggtaag tatgtgagat catgcatatg tcagttagct agatttagcc attctgcagt 3721 gtatgcatat ttcaaacatg ttgtatacca taaatatata taatttttgt caattaaaaa 3781 atagttttca aaaaagaaat ggcagtataa ccaaaactaa tctattatta tttttcttcc 3841 cttaggagag ttaaacagag aaaattgttg atgtatacta gttgatttgt gctctgagtg 3901 ttgtctttaa tttaacttta tttatggcct gtattagtat agtacacaat ttgatattgg 3961 tatattctct actctattaa gaaacacctt acctagttag agtgggaatg gtcaattgtg 4021 atttacccca gatgatggaa atcatggtaa aggatagcct tcaatgagag tcttaaagat 4081 atggaaagtg gctgagaaaa gaagggaaaa tgttaaagaa agcttgtagt ttcttgtata 4141 tatcatatat tagttacata catatgttac atgcatgtta catatgtaga tgacatttta 4201 aaattatata ttaaccacat gtatataagc agtagtagaa tatatcacat aaacacaagc 4261 ttatataaaa ggtatattta aactttaaag taaagaaaaa taataaaatg aactacgtat 4321 gaactcttaa aaaaaaaaaa aaaaaaaaaa aaaaaa //