LOCUS BC063795 2234 bp mRNA linear HUM 19-MAR-2007 DEFINITION Homo sapiens estrogen-related receptor alpha, mRNA (cDNA clone MGC:70614 IMAGE:6527166), complete cds. ACCESSION BC063795 VERSION BC063795.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2234) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2234) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 141 Row: l Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 18860919. FEATURES Location/Qualifiers source 1..2234 /db_xref="H-InvDB:HIT000261181" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:70614 IMAGE:6527166" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2234 /gene="ESRRA" /gene_synonym="ERR1" /gene_synonym="ERRa" /gene_synonym="ERRalpha" /gene_synonym="NR3B1" /db_xref="GeneID:2101" /db_xref="HGNC:HGNC:3471" /db_xref="MIM:601998" CDS 172..1443 /gene="ESRRA" /gene_synonym="ERR1" /gene_synonym="ERRa" /gene_synonym="ERRalpha" /gene_synonym="NR3B1" /codon_start=1 /product="estrogen-related receptor alpha" /protein_id="AAH63795.2" /db_xref="GeneID:2101" /db_xref="HGNC:HGNC:3471" /db_xref="MIM:601998" /translation="MSSQVVGIEPLYIKAEPASPDSPKGSSETETEPPVALAPGPAPT RCLPGHKEEEDGEGAGPGEQGGGKLVLSSLPKRLCLVCGDVASGYHYGVASCEACKAF FKRTIQGSIEYSCPASNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQK YKRRPEVDPLPFPGPFPAGPLAVAGGPRKTAAPVNALVSHLLVVEPEKLYAMPDPAGP DGHLPAVATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQR SLPLQDELAFAEDLVLDEEGARAAGLGELGAALLQLVRRLQALRLEREEYVLLKALAL ANSDSVHIEDAEAVEQLREALHEALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTA GKVLAHFYGVKLEGKVPMHKLFLEMLEAMMD" BASE COUNT 419 a 663 c 756 g 396 t ORIGIN 1 aagcagccgg cggcgccgcc gagtgagggg acgcggcgcg gtggggcggc gcggcccgag 61 gaggcggcgg aggaggggcc gcccgcggcc cccggctcac tccggcactc cgggccgctc 121 ggcccccatg cctgcccgac cgcgctgccg gagccccagg tgaccagcgc catgtccagc 181 caggtggtgg gcattgagcc tctctacatc aaggcagagc cggccagccc tgacagtcca 241 aagggttcct cggagacaga gaccgagcct cctgtggccc tggcccctgg tccagctccc 301 actcgctgcc tcccaggcca caaggaagag gaggatgggg agggggctgg gcctggcgag 361 cagggcggtg ggaagctggt gctcagctcc ctgcccaagc gcctctgcct ggtctgtggg 421 gacgtggcct ccggctacca ctatggtgtg gcatcctgtg aggcctgcaa agccttcttc 481 aagaggacca tccaggggag catcgagtac agctgtccgg cctccaacga gtgtgagatc 541 accaagcgga gacgcaaggc ctgccaggcc tgccgcttca ccaagtgcct gcgggtgggc 601 atgctcaagg agggagtgcg cctggaccgc gtccggggtg ggcggcagaa gtacaagcgg 661 cggccggagg tggacccact gcccttcccg ggccccttcc ctgctgggcc cctggcagtc 721 gctggaggcc cccggaagac agcagcccca gtgaatgcac tggtgtctca tctgctggtg 781 gttgagcctg agaagctcta tgccatgcct gaccccgcag gccctgatgg gcacctccca 841 gccgtggcta ccctctgtga cctctttgac cgagagattg tggtcaccat cagctgggcc 901 aagagcatcc caggcttctc atcgctgtcg ctgtctgacc agatgtcagt actgcagagc 961 gtgtggatgg aggtgctggt gctgggtgtg gcccagcgct cactgccact gcaggatgag 1021 ctggccttcg ctgaggactt agtcctggat gaagaggggg cacgggcagc tggcctgggg 1081 gaactggggg ctgccctgct gcaactagtg cggcggctgc aggccctgcg gctggagcga 1141 gaggagtatg ttctactaaa ggccttggcc cttgccaatt cagactctgt gcacatcgaa 1201 gatgccgagg ctgtggagca gctgcgagaa gctctgcacg aggccctgct ggagtatgaa 1261 gccggccggg ctggccccgg agggggtgct gagcggcggc gggcgggcag gctgctgctc 1321 acgctaccgc tcctccgcca gacagcgggc aaagtgctgg cccatttcta tggggtgaag 1381 ctggagggca aggtgcccat gcacaagctg ttcttggaga tgctcgaggc catgatggac 1441 tgaggcaagg ggtgggactg gtgggggttc tggcaggacc tgcctagcat ggggtcagcc 1501 ccaagggctg gggcggagct ggggtctggg cagtgccaca gcctgctggc agggccaggg 1561 caatgccatc agcccctggg aacaggcccc acgccctctc ctccccctcc tagggggtgt 1621 cagaagctgg gaacgtgtgt ccaggctctg ggcacagtgc tgccccttgc aagccataac 1681 gtgcccccag agtgtagggg gccttgcgga agccataggg ggctgcacgg gatgcgtggg 1741 aggcagaaac ctatctcagg gagggaaggg gatggaggcc agagtctccc agtgggtgat 1801 gcttttgctg ctgcttaatc ctaccccctc ttcaaagcag agtgggactt ggagagcaaa 1861 ggcccatgcc cccttcgctc ctcctctcat catttgcatt gggcattagt gtcccccctt 1921 gaagcaataa ctccaagcag actccagccc ctggacccct ggggtggcca gggcttcccc 1981 atcagctccc aacgagcctc ctcagggggt aggagagcac tgcctctatg ccctgcagag 2041 caataacact atatttattt ttgggtttgg ccagggaggc gcagggacat ggggcaagcc 2101 agggcccaga gcccttggct gtacagagac tctattttaa tgtatatttg ctgcaaagag 2161 aaaccgcttt tggttttaaa cctttaatga gaaaaaaata tataataccg agctcaaaaa 2221 aaaaaaaaaa aaaa //