LOCUS BC063447 3569 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1, mRNA (cDNA clone MGC:71081 IMAGE:5500032), complete cds. ACCESSION BC063447 VERSION BC063447.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3569) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3569) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lou Staudt cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 135 Row: p Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 67188444. FEATURES Location/Qualifiers source 1..3569 /db_xref="H-InvDB:HIT000260907" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:71081 IMAGE:5500032" /tissue_type="Lymph, lymphoma" /clone_lib="NIH_MGC_85" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3569 /gene="CTDP1" /gene_synonym="CCFDN" /gene_synonym="FCP1" /db_xref="GeneID:9150" /db_xref="HGNC:HGNC:2498" /db_xref="MIM:604927" CDS 103..2706 /gene="CTDP1" /gene_synonym="CCFDN" /gene_synonym="FCP1" /codon_start=1 /product="CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1" /protein_id="AAH63447.1" /db_xref="GeneID:9150" /db_xref="HGNC:HGNC:2498" /db_xref="MIM:604927" /translation="MEVPAAGRVPAEGAPTAAVAEVRCPGPAPLRLLEWRVAAGAAVR IGSVLAVFEAAASAQSAGASQSRVASGGCVRPARPERRLRSERAGVVRELCAQPGQVV APGAVLVRLEGCSHPVVMKGLCAECGQDLTQLQSKNGKQQVPLSTATVSMVHSVPELM VSSEQAEQLGREDQQRLHRNRKLVLMVDLDQTLIHTTEQHCQQMSNKGIFHFQLGRGE PMLHTRLRPHCKDFLEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDE CIDPFSKTGNLRNLFPCGDSMVCIIDDREDVWKFAPNLITVKKYVYFQGTGDMNAPPG SRESQTRKKVNHSRGTEVSEPSPPVRDPEGVTQAPGVEPSNGLEKPARELNGSEAATP RDSPRPGKPDERDIWPPAQAPTSSQELAGAPEPQGSCAQGGRVAPGQRPAQGATGTDL DFDLSSDSESSSESEGTKSSSSASDGESEGKRGRQKPKAAPEGAGALAQGSSLEPGRP AAPSLPGEAEPGAHAPDKEPELGGQEEGERDGLCGLGNGCADRKEAETESQNSELSGV TAGESLDQSMEEEEEEDTDEDDHLIYLEEILVRVHTDYYAKYDRYLNKEIEEAPDIRK IVPELKSKVLADVAIIFSGLHPTNFPIEKTREHYHATALGAKILTRLVLSPDAPDRAT HLIAARAGTEKVLQAQECGHLHVVNPDWLWSCLERWDKVEEQLFPLRDDHTKAQRENS PAAFPDREGVPPTALFHPMPVLPKAQPGPEVRIYDSNTGKLIRTGARGPPAPSSSLPI RQEPSSFRWTTSLEKAATTATARRGGLRSRRRSPSPGSQGPAGSGRSGHLRPARGARQ GAGGPEATRGS" BASE COUNT 755 a 1062 c 1173 g 579 t ORIGIN 1 ggaactacag cgtcgccgcc tgggttgtgt cgccgcggta ggcgctgcgc tctgagcgca 61 gcgcaggccc cgtaccgacc gcccgcccgc cctctgtccg cgatggaggt gccggccgcg 121 ggtcgcgttc ctgccgaggg cgccccgacg gcggctgtgg ccgaggtgcg ctgcccgggg 181 cccgcgccgc tgcgcctgct ggagtggagg gtggcggcgg gcgcggccgt gcgcatcggc 241 tcggtgctgg ccgtgttcga ggccgccgcc tccgcgcagt ccgccggggc ctctcagtcc 301 cgtgtagcct ccgggggctg cgtgcgcccc gcgcggccgg aacgcaggct gaggtcggag 361 cgcgcgggcg tggtgcggga gctgtgcgcg cagccgggcc aggtggtcgc cccaggagcg 421 gttctggtga ggttggaagg atgcagccac ccggttgtca tgaaaggcct gtgtgctgaa 481 tgtggccaag acctcaccca gttgcagagt aagaacggga agcagcaggt gccgctgtcc 541 acggcgaccg tgtccatggt gcacagcgtg ccggagttga tggtgagctc cgagcaagct 601 gaacagctgg gaagagaaga ccagcagcga ctgcaccgaa accggaagct ggtgctcatg 661 gtggacttgg accagacgtt gattcacaca accgagcagc actgtcagca gatgtcgaat 721 aaaggcatct ttcacttcca gctgggccgg ggtgagccca tgctgcacac gcgcctgcgt 781 ccacactgca aggacttcct ggagaagatc gccaagctgt acgagctgca cgtcttcacc 841 ttcggcagcc ggctgtacgc acacaccatc gcaggctttt tagaccccga gaagaagctt 901 ttttctcacc gaatattatc aagggatgaa tgtattgacc cattttctaa aacgggaaac 961 cttagaaatc tctttccttg tggagactca atggtttgca ttattgatga tcgagaagat 1021 gtctggaagt ttgcccccaa tctgataact gtgaagaaat atgtatactt ccagggcacg 1081 ggtgatatga atgcgccccc tgggtcccga gaatctcaga cgagaaagaa agtaaatcat 1141 tctcgaggca ctgaggtctc agagccatct ccgcccgtga gagaccctga gggggtaacg 1201 caggcccctg gagtggagcc cagcaatggc ctggagaagc ctgcacggga gctgaacggc 1261 agcgaggccg ccaccccgcg ggactcaccc cgccccggga agccagacga gagggacatc 1321 tggccccctg cccaggcccc caccagcagc caagagctgg caggcgctcc tgagccccag 1381 ggatcctgtg cgcagggtgg ccgggtggca ccgggacagc ggcctgccca gggtgccacg 1441 ggcactgacc tggactttga cttatccagc gacagcgaga gcagcagtga gtccgagggc 1501 acgaagtcct cctcctccgc ctctgatggc gaaagcgagg ggaaaagagg ccggcagaag 1561 ccgaaggctg ccccagaggg agccggggcg ctggcacagg gcagttccct ggagccgggg 1621 cggcctgcag caccgagtct ccccggagag gccgagcctg gcgcgcatgc cccggacaag 1681 gagcctgagc tgggtgggca ggaggagggc gagcgggatg gcctctgcgg cctgggcaac 1741 ggctgtgccg acaggaagga ggcggagacc gagtcacaga acagcgagct gtcgggggtc 1801 actgcgggtg agtccctgga ccagagcatg gaggaggagg aggaggagga cacggatgag 1861 gatgaccacc tcatctacct ggaggagatc ctggtccgtg tacacactga ctactatgcc 1921 aagtatgacc gctacctcaa caaggagatc gaggaggcgc cggacatccg caagatcgtg 1981 ccggagctca agagcaaggt gctggcagac gtggccataa ttttcagtgg gctacacccg 2041 acaaacttcc cgatagagaa gacgcgggag cattaccacg ccacggcgct gggagcgaag 2101 atcctcactc ggctggtgct gagccccgac gcccctgaca gggccacgca cctgatcgcc 2161 gcgcgagctg gcacagagaa ggtgctgcag gcacaggagt gcggacacct gcacgtggtc 2221 aaccctgact ggctgtggag ctgcctggag cgctgggaca aggtggagga gcagctcttc 2281 ccgctcaggg acgatcacac caaggcacag agggagaaca gccctgcggc ctttcccgac 2341 cgggagggtg tgccccccac cgccttgttc cacccgatgc cggttcttcc caaggcccag 2401 cctggccccg aggttcggat ctacgactcc aacacgggga agctcatcag gacgggcgcc 2461 cgggggcccc cagcaccctc cagctcccta cccatccgcc aggagccctc ttccttcagg 2521 tggacgacat ccttggagaa ggcagcgacg acagcgacag cgagaagagg aggcctgagg 2581 agcaggagga ggagccccag ccccggaagc cagggacccg cagggagcgg acgctcgggg 2641 cacctgcgtc cagcgagagg agcgcggcag ggggccgggg gcccagaggc cacaagagga 2701 agctgaatga agaggacgcc gccagcgagt ccagcaggga gtccagcaac gaggacgagg 2761 gcagcagctc cgaggccgac gagatggcca aggcgctgga ggcggagctc aacgacctca 2821 tgtgagcgcg ggcagcgggc agggactgaa gcctgaccga cctccagcag cactcagacg 2881 tccccggacc agccctcagt ctcggtccac gctgctttct tcccaaagga catgtatatt 2941 tgcagagctc cacatacaga aacacattat tttgcagaaa taggtgtttt taagaagttt 3001 tactacagga atgtctactt ttgtaagtga caggtgttaa aggcccaggt gtgctgtgcc 3061 aaagagctca gcagaggctc acgtggccca ggctggtgcg cccgctgtct cggtaagggg 3121 cgggttggtg tgttttcccc ttgtgtacca gagcacattc cttaggggac ggctttgggg 3181 gtcccacgag acatggacta ggagtttaag caggacagtg tgcgtgcacg agctccgagc 3241 ccagcacaga catgcctgga acccccgccg cctgctgctc cctcctaggg aacccatttc 3301 cggggaacgc cgtgactgtc gggcagcctg gagcttcctg cagcctccta cgcagggtcc 3361 acgccacgtg gcctgggctg ccatcctgcc gtcctcccac tggcatcctg gcaagggggc 3421 gttgcttttc ctgggtggcc ttttatgtct tggagacacc tgatgtaaag tttctgtaaa 3481 tctatttcat atctgaccca ccaaacagat ttctctttaa taaaaatcct ttttgtaaaa 3541 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa //