LOCUS       BC063043                2534 bp    mRNA    linear   HUM 11-AUG-2006
DEFINITION  Homo sapiens perforin 1 (pore forming protein), mRNA (cDNA clone
            MGC:65093 IMAGE:5748582), complete cds.
ACCESSION   BC063043
VERSION     BC063043.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2534)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2534)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Life Technologies, Inc.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 119 Row: i Column: 6
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 45935369.
FEATURES             Location/Qualifiers
     source          1..2534
                     /db_xref="H-InvDB:HIT000260750"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:65093 IMAGE:5748582"
                     /tissue_type="Pancreas, Spleen, adult pooled"
                     /clone_lib="NIH_MGC_120"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..2534
                     /gene="PRF1"
                     /gene_synonym="FLH2"
                     /gene_synonym="HPLH2"
                     /gene_synonym="MGC65093"
                     /gene_synonym="P1"
                     /gene_synonym="PFP"
                     /db_xref="GeneID:5551"
                     /db_xref="HGNC:HGNC:9360"
                     /db_xref="MIM:170280"
     CDS             119..1786
                     /gene="PRF1"
                     /gene_synonym="FLH2"
                     /gene_synonym="HPLH2"
                     /gene_synonym="MGC65093"
                     /gene_synonym="P1"
                     /gene_synonym="PFP"
                     /codon_start=1
                     /product="perforin 1 (pore forming protein)"
                     /protein_id="AAH63043.1"
                     /db_xref="GeneID:5551"
                     /db_xref="HGNC:HGNC:9360"
                     /db_xref="MIM:170280"
                     /translation="MAARLLLLGILLLLLPLPVPAPCHTAARSECKRSHKFVPGAWLA
                     GEGVDVTSLRRSGSFPVDTQRFLRPDGTCTLCENALQEGTLQRLPLALTNWRAQGSGC
                     QRHVTRAKVSSTEAVARDAARSIRNDWKVGLDVTPKPTSNVHVSVAGSHSQAANFAAQ
                     KTHQDQYSFSTDTVECRFYSFHVVHTPPLHPDFKRALGDLPHHFNASTQPAYLRLISN
                     YGTHFIRAVELGGRISALTALRTCELALEGLTDNEVEDCLTVEAQVNIGIHGSISAEA
                     KACEEKKKKHKMTASFHQTYRERHSEVVGGHHTSINDLLFGIQAGPEQYSAWVNSLPG
                     SPGLVDYTLEPLHVLLDSQDPRREALRRALSQYLTDRARWRDCSRPCPPGRQKSPRDP
                     CQCVCHGSAVTTQDCCPRQRGLAQLEVTFIQAWGLWGDWFTATDAYVKLFFGGQELRT
                     STVWDNNNPIWSVRLDFGDVLLATGGPLRLQVWDQDSGRDDDLLGTCDQAPKSGSHEV
                     RCNLNHGHLKFRYHARCLPHLGGGTCLDYVPQMLLGEPPGNRSGAVW"
BASE COUNT          544 a          774 c          714 g          502 t
ORIGIN      
        1 ggctggtgca aggagccaca gtgggctgcc tggggggctg atgccaccat tccaggagcc
       61 tcggtgaaga gaggatatcc atctgtgtag ccgcttctct atacgggatt ccagctccat
      121 ggcagcccgt ctgctcctcc tgggcatcct tctcctgctg ctgcccctgc ccgtccctgc
      181 cccgtgccac acagccgcac gctcagagtg caagcgcagc cacaagttcg tgcctggtgc
      241 atggctggcc ggggagggtg tggacgtgac cagcctccgc cgctcgggct ccttcccagt
      301 ggacacacaa aggttcctgc ggcccgacgg cacctgcacc ctctgtgaaa atgccctaca
      361 ggagggcacc ctccagcgcc tgcctctggc gctcaccaac tggcgggccc agggctctgg
      421 ctgccagcgc catgtaacca gggccaaagt cagctccact gaagctgtgg cccgggatgc
      481 ggctcgtagc atccgcaacg actggaaggt cgggctggac gtgactccta agcccaccag
      541 caatgtgcat gtgtctgtgg ccggctcaca ctcacaggca gccaactttg cagcccagaa
      601 gacccaccag gaccagtaca gcttcagcac tgacacggtg gagtgccgct tctacagttt
      661 ccatgtggta cacactcccc cgctgcaccc tgacttcaag agggccctcg gggacctgcc
      721 ccaccacttc aacgcctcca cccagcccgc ctacctcagg cttatctcca actacggcac
      781 ccacttcatc cgggctgtgg agctgggtgg ccgcatatcg gccctcactg ccctgcgcac
      841 ctgcgagctg gccctggaag ggctcacgga caacgaggtg gaggactgcc tgactgtcga
      901 ggcccaggtc aacataggca tccacggcag catctctgcc gaagccaagg cctgtgagga
      961 gaagaagaag aagcacaaga tgacggcctc cttccaccaa acctaccggg agcgccattc
     1021 ggaagtggtt ggcggccatc acacctccat taacgacctg ctgttcggga tccaggccgg
     1081 gcccgagcag tactcagcct gggtaaactc gctgcccggc agccctggcc tggtggacta
     1141 caccctggaa cccctgcacg tgctgctgga cagccaggac ccgcggcggg aggcactgag
     1201 gagggccctg agtcagtacc tgacggacag ggctcgctgg agggactgca gccggccgtg
     1261 cccaccaggg cggcagaaga gcccccgaga cccatgccag tgtgtgtgcc atggctcagc
     1321 ggtcaccacc caggactgct gccctcggca gaggggcctg gcccagctgg aggtgacctt
     1381 catccaagca tggggcctgt ggggggactg gttcactgcc acggatgcct atgtgaagct
     1441 cttctttggt ggccaggagc tgaggacgag caccgtgtgg gacaataaca accccatctg
     1501 gtcagtgcgg ctggattttg gggatgtgct cctggccaca ggggggcccc tgaggttgca
     1561 ggtctgggat caggactctg gcagggacga tgacctcctt ggcacctgtg atcaggctcc
     1621 caagtctggt tcccatgagg tgagatgcaa cctgaatcat ggccacctaa aattccgcta
     1681 tcatgccagg tgcttgcccc acctgggagg aggcacctgc ctggactatg tcccccaaat
     1741 gcttctgggg gagcctccag gaaaccggag tggggccgtg tggtgagaac agtgagcttg
     1801 gaaaggacca gtatgcttgg actgaagggg ttctcacagt gggagccagg gctgtcttcg
     1861 tattcccatt agaccaagct tatccaaccc gaggcccgca tgcggcccag gatggctttg
     1921 aatgcggccc aacgcaaatt cgcaaacttt cttaaaacat tatgagtttc tttttgctat
     1981 tttttttttt ttttttagct catcggctat cgttagtgct agtggatttt acatgtggcc
     2041 caacacaatt cttcttccaa cgtggcccag agaagccaaa agattggata cgcatcagac
     2101 agatggaaaa gggagattca gactgttttt cagggaggtg gctgggttta cacgctaatc
     2161 ccgattcacc ctgtccaaac tgcctaagcc ctccgccatt ctcaagccct gcagtcacag
     2221 ctacacagat cacagcttca gccaggagct gggcagaagg ccaagaggct gttcccacca
     2281 ggctgctcag ggctggtctt ttaggaccct tcccttgagc cctctatggt gtggcaaagc
     2341 cttcattgcc ttaactggag ccccatcagc tccagctgct ctgtcttctt tgcccacaat
     2401 gctttgcccc tgagacaaat ggaggcctgt cctgacctgt ctcaccatgt acatagcttg
     2461 ataaagggcc aataaatatg atgttatggt gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     2521 aaaaaaaaaa aaaa
//