LOCUS BC062700 1502 bp mRNA linear HUM 16-DEC-2003 DEFINITION Homo sapiens bromodomain, testis-specific, mRNA (cDNA clone IMAGE:6617741), partial cds. ACCESSION BC062700 VERSION BC062700.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1502) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1502) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (25-NOV-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield, Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin, Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott, Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy, George Yang, Scott Zuyderduyn, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 51 Row: n Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4502452. FEATURES Location/Qualifiers source 1..1502 /db_xref="H-InvDB:HIT000260591" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6617741" /tissue_type="Testis" /clone_lib="NIH_MGC_82" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..>1502 /gene="BRDT" /gene_synonym="BRD6" /db_xref="GeneID:676" /db_xref="MIM:602144" CDS 110..>1502 /gene="BRDT" /gene_synonym="BRD6" /codon_start=1 /product="BRDT protein" /protein_id="AAH62700.1" /db_xref="GeneID:676" /db_xref="MIM:602144" /translation="MSLPSRQTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLW KHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIIKRLENKYYAKASECIEDFNTMF SNCYLYNKPGDDIVLMAQALEKLFMQKLSQMPQEEQVVGVKERIKKGTQQNIAVSSAK EKSSPSATEKVFKQQEIPSVFPKTSISPLNVVQGASVNSSSQTAAQVTKGVKRKADTT TPATSAVKASSEFSPTFTEKSVALPPIKENMPKNVLPDSQQQYNVVKTVKVTEQLRHC SEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYKDA YKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTD ITETTGRENTNEASSEGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRKLNK KKEKSKKKKKKKKK" misc_feature 188..514 /gene="BRDT" /gene_synonym="BRD6" /note="BROMO; Region: bromo domain" /db_xref="CDD:smart00297" misc_feature 920..1240 /gene="BRDT" /gene_synonym="BRD6" /note="BROMO; Region: bromo domain" /db_xref="CDD:smart00297" BASE COUNT 537 a 286 c 289 g 390 t ORIGIN 1 ggggacccca tcaacatcgt gcgacagtcc gggcagttga gaaggccacc ccgcttcgtg 61 cctgcagccc aggacatgta cttgtagaca ggattcaaag cagttaagaa tgtctctgcc 121 aagtcgacaa acagctatta ttgttaaccc tcctccacca gaatatataa atactaagaa 181 aaatgggcga ttgacaaatc aacttcagta tctacaaaaa gttgtcctaa aggatttatg 241 gaagcatagt ttttcatggc cctttcaacg tcctgtggat gctgtgaaac taaagttgcc 301 tgattattat accattataa aaaacccaat ggatttaaat acaattatta agcgcttgga 361 gaataaatat tatgcgaagg cttcagaatg tatagaagac ttcaatacaa tgttctcaaa 421 ttgttattta tataacaagc ctggagatga cattgttctt atggcacaag ctctagagaa 481 gctgtttatg cagaaattat ctcagatgcc acaagaagag caagttgtgg gtgttaagga 541 aagaatcaag aaaggcactc aacagaatat agctgtttct tctgctaaag aaaaatcatc 601 acccagcgca acagaaaaag tatttaagca gcaagaaatt ccttctgtat ttcctaagac 661 atctatttct cccttgaacg tggtacaggg agcttcagtc aactccagtt cacaaactgc 721 ggcccaagtt acaaaaggtg tgaagaggaa agcagataca acaactcctg caacttcagc 781 agttaaagca agtagtgaat tttctccaac attcacagaa aaatcagtgg cactgccacc 841 tataaaagaa aatatgccaa agaatgtttt gccagattct cagcaacaat ataatgttgt 901 gaagactgtt aaagtaactg aacaattaag gcactgtagt gagattctta aagaaatgct 961 tgcaaagaaa catttttcat atgcatggcc cttttataat cctgttgacg ttaatgcttt 1021 gggactccat aactactatg acgttgtcaa aaatccgatg gatcttggaa ctattaagga 1081 gaaaatggat aaccaagaat ataaggatgc atacaaattt gcggcagatg ttagattaat 1141 gttcatgaat tgctacaagt acaatcctcc agatcacgaa gttgtgacaa tggcaagaat 1201 gcttcaggat gttttcgaaa cgcatttttc aaagatcccg attgaacctg ttgagagtat 1261 gcctttatgt tacatcaaaa cagatatcac agaaaccact ggtagagaga acactaatga 1321 agcctcctct gaagggaact cttctgatga ttctgaagat gagcgagtta agcgtcttgc 1381 aaagcttcag gagcagctta aagctgtaca tcaacagctc caggttttgt cccaagtacc 1441 tttccgtaag ctaaataaaa agaaagagaa gtccaaaaaa aaaaaaaaaa aaaaaaaaaa 1501 aa //