LOCUS BC060839 4169 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b, mRNA (cDNA clone MGC:71739 IMAGE:5273705), complete cds. ACCESSION BC060839 VERSION BC060839.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4169) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4169) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-NOV-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 133 Row: n Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 42476153. FEATURES Location/Qualifiers source 1..4169 /db_xref="H-InvDB:HIT000260141" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:71739 IMAGE:5273705" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..4169 /gene="PTPLB" /db_xref="GeneID:201562" /db_xref="HGNC:HGNC:9640" CDS 53..817 /gene="PTPLB" /codon_start=1 /product="protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b" /protein_id="AAH60839.1" /db_xref="GeneID:201562" /db_xref="HGNC:HGNC:9640" /translation="MAAVAATAAAKGNGGGGGRAGAGDASGTRKKKGPGPLATAYLVI YNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIVPS SVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHL PYLIKWARYTLFIVLYPMGVSGELLTIYAALPFVRQAGLYSISLPNKYNFSFDYYAFL ILIMISYIPIFPQLYFHMIHQRRKILSHTEEHKKFE" BASE COUNT 1190 a 823 c 832 g 1324 t ORIGIN 1 gtagtccggc ccgagccgct cgcgctagga gagcgggctt cgggcacttg acatggcggc 61 agtggcggcg actgcagcag cgaaggggaa tgggggcggc ggtggcaggg ccggggccgg 121 ggacgccagc ggcacgcgga agaagaaggg cccggggccc ctggccacgg cgtacctggt 181 catctacaat gtggtgatga cagccgggtg gctggttata gcggttggtc tggtccgagc 241 atacctggct aagggtagct accatagcct ttattattca attgaaaagc ctttgaaatt 301 ctttcaaact ggagccttat tggagatttt acattgtgct ataggaattg ttccatcttc 361 tgttgtcctg acttctttcc aggtgatgtc aagagttttt ctaatatggg cagtaacaca 421 tagcgtcaaa gaggtacaga gtgaagacag tgtcctcctg tttgttattg catggacgat 481 cacggaaatc atccgttact ccttttatac attcagtcta ttaaaccatc tgccttacct 541 catcaaatgg gccaggtaca cacttttcat tgtgctgtac ccaatgggag tgtcaggaga 601 actgctcaca atatatgcag ctctgccctt tgtcagacaa gctggcctat attccatcag 661 tttacccaac aaatacaatt tctcttttga ctactatgca ttcctgattc taataatgat 721 ctcctacatt ccaatttttc cccagttata cttccacatg atacaccaga gaagaaagat 781 cctttctcat actgaagaac acaagaaatt tgaatagttc ctgctttctg cacctcccac 841 caaaacaaac ttttcaatga tcaaaaaatg ctgcagattt tttgagttcc caatacgttt 901 catagaaaat aagtaagaac tatttttaaa atattcaaac aaaactaaaa caaaaatcca 961 gtgtcacatg ggcctgagat tttattttag aaaaaggttg ttacataaaa caccctggcc 1021 agttcatttc agcatgctct ttcaaccaga agttcttaat atttatgatg gcactagaaa 1081 gggatttggc attttatgtc cttctgtgtc cttcatgtat ctgatcaatg aagacctgta 1141 acactaagta cttgagagtt acagtctgaa taatgaagtc gtaccagctg aatagcccag 1201 cttgcagtat agttatgttt cagtctgcag tgtgtttagc attcccttgt caaagtgctt 1261 gactgcatgc tggaaacttt gtatttttga agcggcaaac tctgttctct ggaatgctct 1321 gaagttatgg ctgggaccta tcccctcaca tctaatgaat gaattataaa atgtatatgt 1381 ctatgaagct tcggggtagt gcctgtaatc agaaaacaac ttagaaccct tttgtttgtt 1441 tccaattgag tcattactgc ctgccactaa gaaacgtgct tgaatctaat aagtatgtgt 1501 taccgtaaag aatatatctt atctggagct cagcctcaat catgtcttaa caaaatgaca 1561 ggtctcagaa agggggagct caatagctca aaagtgacaa gtccttttca cagcaccgtt 1621 ctcagaacac ctctgagtaa cgtgtttgcc agtagctatt ctcactgatg cactgatggc 1681 cctgaagaag cggatccagt cacataggaa aggaggctgt gttagtgaaa gcacatggaa 1741 ggtgttgctt tagaaaggta gtcaggaaaa acattcagga atagatttat acaccattat 1801 tgttttattt ttaaattttc attcactctt ctgtttggat acttttgcta attaacgtcc 1861 tatgttaatt tccaccaagc tataagtcca tagtcagtaa aacattcccc ttgggctgtc 1921 atgagctaaa agcagtgtca tctccgcatg ttggagcagc caagaaatag tttggtacta 1981 ccgacattgt ctaatccatg tcacatcctc atacaattta attgctcaac catgcattta 2041 aaactcctca agaaaggatt ggtactgcaa ctgtaggtaa actgaaaaaa aataagaaag 2101 aaagagttgg atgaaaatgt gaaagcccaa gtttagatgt gcattaagta ttaaatagca 2161 cagtatcttc ttcatggagc cttttttcct cccccatccc ctgcagctgc ctttttttgg 2221 gggcagggtg ggggttgatg ttgaacttta agagtttaaa agtttagctt attgagtagt 2281 tgtcatttaa aatataattg cgaatatcag aaaactcata ctggaaaact aaattttttt 2341 tttctcttga gacggagtct cgctctgttg cccaggctgg agtgcagtgg cgcgatctcg 2401 gctcactgca agctccacct cccgggttca cgccatcctc ctgcctcagc ctcctgagta 2461 gctgggacta caggtgcctg ccaccacacc cagctaattt tttttgtgtt tttagtagag 2521 acggggtttc accgtgttag ccaggatggt cttgatctcc tgacctcgtg atccacccgc 2581 ctcagcctcc caaagtgctg ggattgcagg catgagccac tgcacccaac ccctggaaaa 2641 ctaaattttt aagtgcttat ttttatagaa gtttgaaaat ttaatgcagg caggtgtgta 2701 ataaattatt tttgaattga acattaaaat tctgcttctt aaagtcagca ctcaacttgg 2761 acatgttgaa attagaatct attcttgtat ttgatagaca aaatatgtgg gaaagatttt 2821 ttgcatgact tttctctcat tttattcttc cataatgtat ttctactata aaatagaatc 2881 aacttgggtt atatttgtca tttactttgt tctgttagat tttttcagtt gtttttggaa 2941 aaattctaga aatcaggatg aaaaatgcag cttttccagg gttgctggac tgggggtttt 3001 atttgggcct ccttattata atttgtcact acttataaaa aacattctgt tgcaaacagt 3061 ggtgttgcat tgaattgaac tttggcaatg agaacacagc acacagctcc cttttcaaaa 3121 agggtctcaa ccccagtgtg tatttttgta catcaacatt tagaatactt atggcagata 3181 agtaaggcat gtcactgtgt ccttcagtaa cctctctcag taactggttt ctttatccct 3241 aacatgaatt catttctcct ttgaagtcat ttattatttt ataaattgag aacaaccaca 3301 ccaccaaatg tcacaccttc ttataaagtg tgaacaagga aggtcatgtt tttgtgggta 3361 ttttgtcaga cttagaggtt tcatttcagg gcatagtcaa aggcatcatc ctcccaacta 3421 cccacttgat tatgtatttc agatccctcc gtgggggcct tcttctgaca gagaattctt 3481 tgaggtccgc agtagtgctt ttgtcagcac agactgctaa tctacatctt gctgcgttct 3541 gtttgctgag gttgggctta ttcatttaac acgtaccaac cattatccag aggcaccatg 3601 gagagttagt catggaataa agcactgtcc ttgcagatga aaaaagtctc cagagcagac 3661 ttctgacagg aaaggtttag atgctggaga gttgaagagg tgtaagaaga gatcgtgccc 3721 tcatttttca cttatttttt tggttattca tttataataa aaggttggca ttgatatggt 3781 acaacctgca aattacttgc agttctgagt ttcagataaa acattataaa acattaaatt 3841 caatacatac tgctcctttg aaatttgggt aaaaaattgt acaaccgtat atatagtcat 3901 ttttgtattt tttctatgtt gtgaaaacca aaattgtaat tttataagtc tttgattcac 3961 taaaattata taatttaaat gtattttttg tatatttaga aataaggagt ccagagacta 4021 cgcttaactt tctatgcatg catttgaaag ctgtttttac ctgataatgt agtaataagt 4081 tgtattcata aaatactgat ctgtgttgca tttcaaaata aactggtgtg tgctctgcct 4141 ggatttgaaa taccaaaaaa aaaaaaaaa //