LOCUS BC059377 2569 bp mRNA linear HUM 28-JUL-2005 DEFINITION Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11), mRNA (cDNA clone IMAGE:30346967), complete cds. ACCESSION BC059377 VERSION BC059377.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2569) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2569) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-OCT-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Stefan Hansson cDNA Library Preparation: Michael Brownstein / Ted Usdin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 133 Row: i Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 11545800 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..2569 /db_xref="H-InvDB:HIT000259977" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:30346967" /tissue_type="Placenta, normal" /clone_lib="NIH_MGC_147" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2569 /gene="GALNT11" /gene_synonym="FLJ21634" /db_xref="GeneID:63917" CDS 356..964 /gene="GALNT11" /gene_synonym="FLJ21634" /codon_start=1 /product="GALNT11 protein" /protein_id="AAH59377.1" /db_xref="GeneID:63917" /translation="MGSVTVRYFCYGCLFTSATWTVLLFVYFNFSEVTQPLKNVPVKG SGPHGPSPKKFYPRFTRGPSRVLEPQFKANKIDDVIDSRVEDPEEGHLKFSSELGMIF NERDQELRDLGYQKHAFNMLISDRLGYHRDVPDTRNAACKEKFYPPDLPAASVVICFY NEAFSALLRTVHSVIDRTPAHLLHEIILVDDDSDFGKECCTW" BASE COUNT 717 a 556 c 510 g 786 t ORIGIN 1 attactcttc ccctcccctg ccagagggat ctctctggga tcttttacct tagtgcctgg 61 tggagttcct ggaggtaaag cccacagaag tgtgggtctc gcacctcctg agactgcttc 121 cccgagtttc tcactctcac tagtccacac cgagcatcca gcaccagctt atggctctgg 181 cagtttctgc tccaggtcta tagtgagcga gagctgctac tttttacttg ggcattcatt 241 caaagtgttg aagaataaca gcctctacca tcccttattc actggctcat cagctgtccc 301 aggttttgct cttctaggaa attgacaatg gcccttcagc tatgctaggt ctataatggg 361 aagtgtcaca gttcggtatt tctgttatgg gtgccttttt acatctgcga cctggacagt 421 tttgcttttt gtttatttca acttcagtga agtgactcag ccacttaaga atgtgcccgt 481 caaggggtct gggccccacg gaccatctcc aaaaaaattc tatccccgtt tcactcgagg 541 cccaagtcga gtgctcgagc cacagttcaa agcaaacaaa attgacgatg tgatagacag 601 tcgtgttgaa gatccagaag aaggccactt gaaattctct tctgaattag gtatgatttt 661 taatgaacgc gatcaagagt tgagagactt gggctatcag aaacatgctt ttaatatgct 721 tatcagtgac cgcttgggct accacagaga tgtgccagac acaaggaatg cagcatgtaa 781 agaaaagttc tacccacctg acctgccagc tgctagtgtt gttatctgtt tctataatga 841 agcgttttct gccttgcttc ggacagtgca cagtgtcata gaccgcacgc cagcacacct 901 gcttcatgag atcatccttg tggatgatga tagtgacttt ggtaaggaat gctgcacctg 961 gtaacattgg atccaggctg tcagtcacta cagcactgac aaacactaac acagctgaac 1021 tttcaagtac gtggtaggtg gggatcctac acgtgcagtc acagctgggc tgaccacaaa 1081 taagtctgaa gaaatccatt atctttgtaa cctgcttata aactatgcta cccaaatttg 1141 ggccgtgaaa ttttttccgt ggcttacttt aaaaaacaca cctcttttta tttgaaataa 1201 ctgtaggttc acaggaagtt acaaagacgg cctatgtacc tttatccagt tgctccatca 1261 taaaattccc ctgtcagaac caggaatcca cattggtaca gtgtgtgtgg tccagggtca 1321 ttctgtcaca caggtggact cccacaaccc tcactgcaat gatacagaac tgtttcctca 1381 cccggagggc ccttgtgctg cctctttcta gtcacacctc ctgctttcct ctactcttcc 1441 ccagtccctg aaaccacgac tctatgattt tgtttccatc tctgattttg ttatttcaag 1501 aatgtcatat aaatggaatc acacggtatg tgaccttttg agatgggctt ttttcatttg 1561 gcatgatgcc ttggcttatg cttctctatt aagtctctta cactgatcgt ccccagataa 1621 aagtggattg cattctgata gctcctcaat gatctctgaa tgccagtatt ttatgattca 1681 ctacatattc tatattctgt acgcctttct taattcaaca tagactcttg ctaagaatgg 1741 ctttgtgtac ccaaacagga tagaaggctt tttattacac tgctcattca gctctcagtg 1801 accttgcaag aaaggctgga agcccacttt atagagggag aaatataaaa agtaatttgc 1861 tcagacccca tagctgttaa gtagtagagt ggaaatgaga cctctggtct gcatagctcc 1921 aagccttctg ctcttttcat gacagcaggc tgcaggaaca cagtggtaca ggtgtatgcc 1981 agtgactttt tcatgcactc gagcgtttat taagtaccac ttgtatcaac atcagagttg 2041 gtataccagt atacttaaat atagaaggta aagaaatgga gagagtcatg ggagcaaaat 2101 tctcaaacct tggccaaaaa caaacaaaca aaaaacctaa taaataaatc tgagtctgga 2161 ccacgtagaa gattggttac atactgattt ctagaattta tggttggttt ttgttttttt 2221 ttaagtcaac ttgtattttg gttttcactt tgtggctatt ttacctaaaa ggaaaaattc 2281 ataatttgag gtggtttgta tattaactat ggaaagaatt actgcttatt atcttacacg 2341 atctttcaag ttattctgaa atatacaggt gaatgacata gaattcctta aaaaatattt 2401 agcaaccttg gaagaaagat gctaaattaa taaaaggaca tattcaatgc tgttcttgtt 2461 attcttggta ggggcaatag aagttgtttc ttaactattt tgaaatggac taagacttaa 2521 taaattcctt tgtaataaaa ggcatttata tcccaaaaaa aaaaaaaaa //