LOCUS BC057389 4355 bp mRNA linear HTC 27-OCT-2008 DEFINITION Homo sapiens HCLS1 binding protein 3, mRNA (cDNA clone IMAGE:5574764), with apparent retained intron. ACCESSION BC057389 VERSION BC057389.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4355) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4355) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-SEP-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 107 Row: g Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 68800429 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..4355 /db_xref="H-InvDB:HIT000259688" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5574764" /tissue_type="Duodenum, adenocarcinoma" /clone_lib="NIH_MGC_88" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" BASE COUNT 903 a 1177 c 1165 g 1110 t ORIGIN 1 gtccccgccg ccgtcatgca gtccccggcg gtgctcgtca cctccaggcg acttcagaat 61 gcccacactg gcctcgacct gactgtgccc cagcaccagg aggtacgggg caagatgatg 121 tctggacacg tggagtacca gatcctggtg gtgacccgtc tggctgcgtt caagtcggcc 181 aagcacaggc ccgaggatgt cgtccagttc ttggtctcca aaaagtacag cgagattgag 241 gagttttacc agaaactgag cagtcgttat gcagcagcca gcctcccccc actacccagg 301 aaggtcctgt ttgttgggga gtctgacatc cgggagagga gagccgtgtt caatgagatc 361 ctgcgctgtg tctccaagga tgccgagttg gcaggcagcc cagagctgct agagttctta 421 ggtaccagat ccccaggggc tgcagggctc accagcagag attcctctgt cctggatggc 481 acagacagtc agacagggaa tgatgaagag gctttcgact tttttgagga gcaagaccaa 541 gtggcagaag agggtccgcc tgtccagagc ctgaagggcg aggatgctga ggaatccttg 601 gaggaggagg aggcgctgga ccctctgggc attatgcggt tggtctcctg ttgttgagag 661 ggcccctttg gtgtattcca ggctttctgg agatgacgtc ccccttccct ggaatctgag 721 aaaagccttg agcatcccag gtcgccccct cgcagggatc tgggccacga ggccttggcc 781 tggtgtgttg ggggaagtag ctctctgcgt gcccttggtg gtgtgcatgt ctctgggact 841 gggcttaggt gtcgcctccc ttctcgggtc acaggatgtc ctccacttgt ggctccgcac 901 tggggcttgg tagagtcctc cgtgacagct cagtagtgca ggctgcgggc ctgtccggct 961 agtgtgggag gactgggtgc tccttccagc tgtgggactc gcagaggtgg ctgcggctct 1021 ctgggctgca tcatctgcat agcaggagca ttcaccttgg ccctgcctcc acacagggcc 1081 attcaccagc catacatctc tggccattta caatctcttt tcttcggttt tcctcagtga 1141 aaatggactc atggtcgtat caacctctta gggctcctgt gacgatgaac tgagttatgt 1201 aaatttagca atcagctacc atcatggccc catctttcag tggaatcaga ccaggccagg 1261 ggtgctgtcc tccccgctct ctaccacaac gaatgtctct tagccgttta ccaaagccct 1321 cgggcgccag atgagtgtag gtcctgccgc agaaaggaat tagagcccag tagaaattag 1381 gcagaagcaa gttcaacttc atcagcatgt agaattctct cctaaaatca cagcccactc 1441 tggaaaggcc ttcttcgtgg ggagggttat gggagggtgg gctgcagggt ggccatgaga 1501 ccagcgtcca ggggtgagga tttgcactgg gaaagggtac gcggcgctca gggagctgca 1561 gcagaaacag gcctgagatc tggggtcctg cggcacctgg gcacagcaag tgccctgcag 1621 tcgctcctcc tggccctccg tggctggcct tgtccctgag tggggtcagc ggccctgagg 1681 gagaggcagc cagagtagtg ggtgatgtgg ggacaagcct gtaatagtca ctccttatca 1741 gcctggccca acgcggcagg cctttcttgg gctttatttt ggtaagggtg aggctttgtt 1801 tgaactcaca ttctctgttg ttctgagtaa ccacacgtag tgccaaaccg agatggactt 1861 tggtggtctg tgccaacctt tggctgaaga acacacttag cagagcggct ccttttttgg 1921 gtaggaaaat gttctttgtg gctggcaagt gctgccttga acttcctact tacttcatta 1981 gcagattgtc aggggagatg tgtcagctat cctgggaccc cttggcgggg cggggggggg 2041 ggggggccag ccccctcccc agctctgtac tctggggccc tcacccctga atcctgggaa 2101 agcttagcac ctaagagtaa tcctgccggc ttaagaccct cccctgctgg ggtttctttt 2161 taaggacccg tgtgacaagg tgctgatgaa tcaacgttat cacctctgtc aggaataata 2221 agtaaatttt ttgagagttt atgaaatgct gggaactaag ttagcatttg cttgcatgat 2281 ctcattatat ctgtaagaca gcatttctga aactacttgc tacaacccat agtaaaaact 2341 atatggtacg ccatgaccca ggacacacat gtataaacat cccataaaac tgaagcaaaa 2401 gttcccagaa ctcatacaaa accttactaa gtgtattgta ctgggatatt ttctattcta 2461 tttcaacgtt tggaaaggtc atgactcgcc aaactgcttt caggatccac tgtgggcaca 2521 ggtcaagaaa cggagccctg gaggcctgca ctggcatcag cctcttctgt gtggtgggaa 2581 actcaagttc agggtcaggt ggttcgtcca cgttcctgca gcctgcagat ggcagagcca 2641 ggaccccacg ccatctccag tccagtcttt atcagcctgg gaggtgggca gggccccagg 2701 attatccccc tttcacagat ggtaaaatcg aggaaggagt tgagcaggat cttggccaga 2761 gccgtgtgtg tggcagagcc gtaccttgaa gttgggtttc cacctcggcc tttcacagac 2821 acccaggtgg gcttgttgat ctctcttggt gccacccacc tgccctttgg tgggggactt 2881 tctgttcttc tcgggaggct gtttgtgcac ccctctccct cccgtgcgct tggttcctgt 2941 gcagatgcag cggcacccgt ttcccagctt gccctgcccc atgtctgggc ttagctctgg 3001 gctctcctgg agcggccacc atttccatgc aaccagcctc ggtccttccc cgccgtggcc 3061 gcggcgaggc gctgctgctc tgctgaaggg ctgctccacg gcagggctgc tgggagggtg 3121 ggagtcgcca gcacaaagcc ggagcccagg ccggcctggc ttttctttgt cttttaaacc 3181 tggttttgat tagggacaag agagcgttat tacaccatta gagagcaatt aaagatagaa 3241 aaagccctca cctcggccca tcccaacacc accgctctct ccatctgctg gggctctctt 3301 ctgaccccgt cccagcagca tccatgcaac cgcaggcaca atgcacgtgc cttttcgtac 3361 tctgcttttc caccctatgg tctgtcccga ttgctgctcc atgtcgcccc tgttttgtat 3421 ttaagtttct attttagaat gtcacggtgc tgagaaaatt gacattctac cctaatagtt 3481 ctgccttatg ctggaaatcc tctgcgggaa acctttttca ttgtgactca aataacacac 3541 aattagtata gaaaaattgc aaacacagat aaaagtcctt tccctgtgaa tttctgaatg 3601 cacctttgaa tattcacatc ttactgccaa aatgagattg tcttgtgtgc cgttctggaa 3661 tttgcttttt tccagcttac atgttctagg tccttccaga tcaatagctg cactctccct 3721 ccttcctctg ctggtttctc agctcgatgg gctgtaagtg gcattaccag gcccttgctt 3781 gtgggcgtgg cggggttttc tgtaggtttt tgctattaca ggcaataacc tgaggaactt 3841 ctacatatac aaagctttta ttctatggag ccttccccta tatacgtgcc ccagagcaag 3901 gtccctgaag ctgcttctgg gggctttggg gtaccattcc agtaaaaggt tctctaaggg 3961 ctgaagcccc tctgttggga ggcccctctg cttttctaag ccctgcccac ccccgccctc 4021 agggcccact cctcccacct cttcttttgc acacagggac cccctccagg ccctgggtcc 4081 ctgaggactc acagcgtcct tgggacaggc tggctcctgt atgaacaaat gcacctgcct 4141 gcaaagctgg tcttcccaga ctccctggaa gggggagccc acacccgggt ccccgtgctg 4201 tggcctccgt ggtgaagctg gatgtttctc tggaatgcca cgttttatgg ttgtttttta 4261 atatggattt tgcttcatct ttcataaaac aaccacatgt attttagtat aaaaataata 4321 tcttactcta tatttggatg aaaaaaaaaa aaaaa //