LOCUS BC056915 1593 bp mRNA linear HUM 05-NOV-2003 DEFINITION Homo sapiens SET binding factor 1, mRNA (cDNA clone IMAGE:6142405), partial cds. ACCESSION BC056915 VERSION BC056915.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1593) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1593) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (25-AUG-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield, Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin, Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott, Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy, George Yang, Scott Zuyderduyn, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 119 Row: l Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..1593 /db_xref="H-InvDB:HIT000259640" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6142405" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..1593 /gene="SBF1" /gene_synonym="MTMR5" /db_xref="GeneID:6305" /db_xref="MIM:603560" CDS <1..1246 /gene="SBF1" /gene_synonym="MTMR5" /codon_start=2 /product="SBF1 protein" /protein_id="AAH56915.1" /db_xref="GeneID:6305" /db_xref="MIM:603560" /translation="FYRTLEGFRLLVEKEWLSFGHRFSHRGAHTLAGQSSGFTPVFLQ FLDCVHQVHLQFPMEFEFSQFYLKFLGYHHVSRRFRTFLLDSDYERIELGLLYEEKGE RRGQVPCRSVWEYVDRLSKRTPVFHNYMYAPEDAEVWDFYTEETLAEGPPYDWELAQG PPEPPEEERSDGGAPQSRRRVVWPCYDSCPRAQPDAISRLLEELQRLETELGQPAERW KDTWDRVKAAQRLEGRPDGRGTPSSLLVSTAPHHRRSLGVYLQEGPVGSTLSLSLDSD QSSGSTTSGSRQAARRSTSTLYSQFQTAESENRSYEGTLYKKGAFMKPWKARWFVLDK TKHQLRYYDHRVDTECKGVIDLAEVEVVAPGTPTMGAPKTVDEKAFFDVKTTRRVYNF CAQDVPSAQQWVDRIQSCLSDA" misc_feature 932..1243 /gene="SBF1" /gene_synonym="MTMR5" /note="PH; Region: Pleckstrin homology domain" /db_xref="CDD:smart00233" BASE COUNT 303 a 515 c 497 g 278 t ORIGIN 1 cttctaccgc acgctggagg gctttcgcct gctggtggag aaggagtggc tgtccttcgg 61 ccatcgcttc agccaccgtg gagctcacac cctggccggg cagagcagcg gcttcacacc 121 cgtcttcctg cagttcctgg actgcgtaca ccaggtccac ctgcagttcc ccatggagtt 181 tgagttcagc cagttctacc tcaagttcct cggctaccac catgtgtccc gccgtttccg 241 gaccttcctg ctcgactctg actatgagcg cattgagctg gggctgctgt atgaggagaa 301 gggggaacgc aggggccagg tgccgtgcag gtctgtgtgg gagtatgtgg accggctgag 361 caagaggacg cctgtgttcc acaattacat gtatgcgccc gaggacgcag aggtgtggga 421 cttctacact gaggagacgc tggccgaggg ccctccctat gactgggaac tggcccaggg 481 gccccctgaa cccccagagg aagaacggtc tgatggaggc gctccccaga gcaggcgccg 541 cgtggtgtgg ccctgttacg acagctgccc gcgggcccag cctgacgcca tctcacgcct 601 gctggaggag ctgcagaggc tggagacaga gttgggccaa cccgctgagc gctggaagga 661 cacctgggac cgggtgaagg ctgcacagcg cctcgagggc cggccagacg gccgtggcac 721 ccctagctcc ctccttgtgt ccaccgcacc ccaccaccgt cgctcgctgg gtgtgtacct 781 gcaggagggg cccgtgggct ccaccctgag cctcagcctg gacagcgacc agagtagtgg 841 ctcaaccaca tccggctccc gtcaggctgc ccgccgcagc accagcaccc tgtacagcca 901 gttccagaca gcagagagtg agaacaggtc ctacgagggc actctgtaca agaagggggc 961 cttcatgaag ccttggaagg cccgctggtt cgtgctggac aagaccaagc accagctgcg 1021 ctactacgac caccgtgtgg acacagagtg caagggtgtc atcgacttgg cggaggtgga 1081 ggttgtggca cctggcacgc ccactatggg tgcccctaag accgtggacg agaaggcctt 1141 ctttgacgtg aagacaacgc gtcgcgttta caacttctgt gcccaggacg tgccctcggc 1201 ccagcagtgg gtggaccgga tccagagctg cctgtcggac gcctgagcct cccagccctg 1261 cccggctgct ctgcttccgg tcgttaccga ccactagggg tgggcagggc cgccccggcc 1321 atgtttacag ccccggccct cgacagtatt gaggccccga gcccccagca cttgtgtgta 1381 cagcccccgt ccccgccccg ccccgcccgg ccggccctaa cttattttgg cgtcacagct 1441 gagcaccgtg ccgggaggtg gccaaggtac agcccgcaat gggcctgtaa atagtccggc 1501 cccgtcagcg tgtgctggtc cagccagcgg ctgcaggcga gtttctagaa ccagagtcta 1561 tataaagaga gaactaacaa aaaaaaaaaa aaa //