LOCUS       BC056869                1569 bp    mRNA    linear   HUM 05-NOV-2003
DEFINITION  Homo sapiens autocrine motility factor receptor, mRNA (cDNA clone
            IMAGE:5109314), partial cds.
ACCESSION   BC056869
VERSION     BC056869.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1569)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1569)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
            Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
            Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
            Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
            Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
            Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
            Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
            George Yang, Scott Zuyderduyn, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 119 Row: c Column: 6
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 21071000.
FEATURES             Location/Qualifiers
     source          1..1569
                     /db_xref="H-InvDB:HIT000259594"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:5109314"
                     /tissue_type="Cervix, carcinoma"
                     /clone_lib="NIH_MGC_12"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            <1..1569
                     /gene="AMFR"
                     /gene_synonym="GP78"
                     /gene_synonym="RNF45"
                     /db_xref="GeneID:267"
                     /db_xref="MIM:603243"
     CDS             <1..609
                     /gene="AMFR"
                     /gene_synonym="GP78"
                     /gene_synonym="RNF45"
                     /codon_start=1
                     /product="AMFR protein"
                     /protein_id="AAH56869.1"
                     /db_xref="GeneID:267"
                     /db_xref="MIM:603243"
                     /translation="HTTNILGITQASNSQLNAMAHQIQEMFPQVPYHLVLQDLQLTRS
                     VEITTDNILEGRIQVPFPTQRSDSIRPALNSPVERPSSDQEEGETSAQTERVPLDLSP
                     RLEETLDFGEVEVEPSEVEDFEARGSRFSKSADERQRMLVQRKDELLQQARKRFLNKS
                     SEDDAASESFLPSEGASSDPVTLRRRMLAAAAERRLQKQQTS"
     misc_feature    43..168
                     /gene="AMFR"
                     /gene_synonym="GP78"
                     /gene_synonym="RNF45"
                     /note="CUE; Region: CUE domain. CUE domains have been
                     shown to bind ubiquitin. It has been suggested that CUE
                     domains are related to pfam00627. CUE domains also occur
                     in two protein of the IL-1 signal transduction pathway,
                     tollip and TAB2"
                     /db_xref="CDD:pfam02845"
BASE COUNT          374 a          404 c          420 g          371 t
ORIGIN      
        1 cacaccacca acattcttgg cattacgcag gccagcaact cccagctcaa tgcaatggct
       61 catcagattc aagagatgtt tccccaggtt ccataccatc tggtactgca ggacctccag
      121 ctgacacgct cagttgaaat aacaacagac aatattttag aaggacggat tcaagtacct
      181 tttcctacac agcggtcaga tagcatcaga cctgcattga acagtcctgt ggaaaggcca
      241 agcagtgacc aggaagaggg agaaacttct gctcagaccg agcgtgtgcc actggacctc
      301 agtcctcgcc tggaggagac gctggacttc ggcgaggtgg aagtggagcc cagtgaggtg
      361 gaagacttcg aggctcgtgg gagccgcttc tccaagtctg ctgatgagag acagcgcatg
      421 ctggtgcagc gtaaggacga actcctccag caagctcgca aacgtttctt gaacaaaagt
      481 tctgaagatg atgcggcctc agagagcttc ctcccctcgg aaggtgcgtc ctctgacccc
      541 gtgaccctgc gtcgaaggat gctggctgcc gccgcggaac ggaggcttca gaagcagcag
      601 acctcctagc gctcccttgc cttcctcagc tgcctcctgc gccctgtgcc cgactgactg
      661 gaggaggcct gtcccaattc tgcccgctcc atggaaaagc gggcttgact gcattgccgc
      721 tgtataaagc atgtggtctt atagtgtttg gacagctgat aaatttaatc cttctttgta
      781 atactttcta tgtgacattt ctcttcccct tagaaacact gcaaatttta actgtaggta
      841 tgatctcttc tggtgttgac tggactgctt ggggtggggg acgatcagga ggaagtgagc
      901 agtcgcctgc ctgcagcagg cagcttctac tcctgcctca tgcatacgtc ccacaaatgc
      961 aggtgtcctg agcaccacac ccagtgggaa gagtgtgggg gaggcgcaca gtgtgagccc
     1021 gcccccacgt cgtggggtaa catctgttat caaactgctg tcgttgttgt ggaagcatgt
     1081 agactgtgcc agaggccaga cccacgggct catgcacccc tgagccagca gggcatcttg
     1141 gaaaaggaac tcttggttcg atacctggag cagaggaggg gaaagtccag ggctataggg
     1201 tgtgatgaag tcaccccttt ctgtcccact acatctggga ctgactttcc gagcctccag
     1261 tccaaagccg gcttgatttc cgtgaactct ggtgctcctg catctcatga gtgtgcccca
     1321 tgggtcccct cccctctcag catttccttg tcccgtctgg acctggggag tggttaggca
     1381 gcaagctttg gtttatggtt ttcattcatt ggtgaagtaa attaggcagt gctaaagcct
     1441 gtgggtttgg tccttgaaca agatgtgggc cttgcaagat gggagagtaa accttgaagg
     1501 gctttattaa agaaataaaa aagaactttt gtatctttta tcctgggaaa aaaaaaaaaa
     1561 aaaaaaaaa
//